Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8004993.1 | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED |
| CAI8004995.1 | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED |
| CAI8004997.1 | E3 UBIQUITIN-PROTEIN LIGASE TTC3 |
| CAI8004999.1 | E3 UBIQUITIN-PROTEIN LIGASE TTC3 |
| CAI8005016.1 | |
| CAI8005018.1 | |
| CAI8005020.1 | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED |
| CAI8005028.1 | MICROTUBULE-ASSOCIATED PROTEIN RP/EB FAMILY MEMBER |
| CAI8005026.1 | MICROTUBULE-ASSOCIATED PROTEIN RP/EB FAMILY MEMBER |
| CAI8005024.1 | MICROTUBULE-ASSOCIATED PROTEIN RP/EB FAMILY MEMBER |
| CAI8005022.1 | MICROTUBULE-ASSOCIATED PROTEIN RP/EB FAMILY MEMBER |
| CAI8005030.1 | MICROTUBULE-ASSOCIATED PROTEIN RP/EB FAMILY MEMBER |
| CAI8005032.1 | |
| CAI8005036.1 | AAA DOMAIN-CONTAINING |
| CAI8005034.1 | AAA DOMAIN-CONTAINING |
| CAI8005038.1 | |
| CAI8005040.1 | |
| CAI8005044.1 | MONOACYLGLYCEROL LIPASE |
| CAI8005042.1 | MONOACYLGLYCEROL LIPASE |
| CAI8005048.1 | MONOACYLGLYCEROL LIPASE |
| CAI8005046.1 | MONOACYLGLYCEROL LIPASE |
| CAI8005050.1 | MONOACYLGLYCEROL LIPASE |
| CAI8005056.1 | LYSOPHOSPHOLIPASE-RELATED |
| CAI8005054.1 | LYSOPHOSPHOLIPASE-RELATED |
| CAI8005052.1 | LYSOPHOSPHOLIPASE-RELATED |
| CAI8005058.1 | |
| CAI8005060.1 | LYSOPHOSPHOLIPASE-RELATED |
| CAI8005062.1 | LYSOPHOSPHOLIPASE-RELATED |
| CAI8005064.1 | |
| CAI8005070.1 | |
| CAI8005068.1 | |
| CAI8005066.1 | |
| CAI8005072.1 | |
| CAI8005074.1 | |
| CAI8005076.1 | |
| CAI8005080.1 | RIBONUCLEASES P/MRP PROTEIN SUBUNIT POP1 |
| CAI8005078.1 | RIBONUCLEASES P/MRP PROTEIN SUBUNIT POP1 |
| CAI8005086.1 | CELL DIVISION CYCLE 16,23,27 |
| CAI8005092.1 | TAURINE IMPORT ATP-BINDING PROTEIN-RELATED |
| CAI8005090.1 | TAURINE IMPORT ATP-BINDING PROTEIN-RELATED |
| CAI8005088.1 | TAURINE IMPORT ATP-BINDING PROTEIN-RELATED |
| CAI8005094.1 | TAURINE IMPORT ATP-BINDING PROTEIN-RELATED |
| CAI8005096.1 | CONSERVED EXPRESSED OXIDOREDUCTASE (EUROFUNG) |
| CAI8005098.1 | L-THREONINE 3-DEHYDROGENASE |
| CAI8005100.1 | PROSTAGLANDIN REDUCTASE |
| CAI8005102.1 | |
| CAI8005111.1 | |
| CAI8005117.1 | |
| CAI8005115.1 | |
| CAI8005113.1 | CHONDROITIN SYNTHASE |
