Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8005221.1 | UPF0739 PROTEIN C1ORF74 |
| CAI8005222.1 | E3 UBIQUITIN-PROTEIN LIGASE NHLRC1-RELATED |
| CAI8005223.1 | FERRITIN |
| CAI8005224.1 | |
| CAI8005225.1 | |
| CAI8005226.1 | LUCIFERASE-LIKE MONOOXYGENASE |
| CAI8005227.1 | PHOSPHOTRIESTERASE-RELATED |
| CAI8005230.1 | CYTOKINE RECEPTOR |
| CAI8005231.1 | |
| CAI8005232.1 | |
| CAI8005228.1 | EPH RECEPTOR A5 |
| CAI8005229.1 | EPH RECEPTOR A5 |
| CAI8005233.1 | |
| CAI8005234.1 | |
| CAI8005235.1 | SCAVENGER RECEPTOR DOMAIN-CONTAINING |
| CAI8005236.1 | |
| CAI8005237.1 | |
| CAI8005238.1 | |
| CAI8005239.1 | |
| CAI8005244.1 | DISCS LARGE |
| CAI8005242.1 | DISCS LARGE |
| CAI8005241.1 | DISCS LARGE |
| CAI8005240.1 | |
| CAI8005245.1 | DISCS LARGE |
| CAI8005243.1 | DISCS LARGE |
| CAI8005246.1 | MEMBRANE-ASSOCIATED GUANYLATE KINASE MAGUK |
| CAI8005247.1 | MEMBRANE-ASSOCIATED GUANYLATE KINASE MAGUK |
| CAI8005248.1 | MEMBRANE-ASSOCIATED GUANYLATE KINASE MAGUK |
| CAI8005251.1 | SRCR DOMAIN-CONTAINING PROTEIN |
| CAI8005250.1 | SRCR DOMAIN-CONTAINING PROTEIN |
| CAI8005249.1 | SRCR DOMAIN-CONTAINING PROTEIN |
| CAI8005253.1 | SRCR DOMAIN-CONTAINING PROTEIN |
| CAI8005252.1 | SRCR DOMAIN-CONTAINING PROTEIN |
| CAI8005254.1 | SRCR DOMAIN-CONTAINING PROTEIN |
| CAI8005255.1 | ADP RIBOSYLATION FACTOR-RELATED |
| CAI8005256.1 | ADP RIBOSYLATION FACTOR-RELATED |
| CAI8005257.1 | OPIOID GROWTH FACTOR RECEPTOR OGFR ZETA-TYPE OPIOID RECEPTOR |
| CAI8005258.1 | OPIOID GROWTH FACTOR RECEPTOR OGFR ZETA-TYPE OPIOID RECEPTOR |
| CAI8005259.1 | OPIOID GROWTH FACTOR RECEPTOR OGFR ZETA-TYPE OPIOID RECEPTOR |
| CAI8005260.1 | RAS GTPASE-ACTIVATING PROTEINS |
| CAI8005261.1 | FIMBRIN/PLASTIN |
| CAI8005263.1 | TATA BOX-BINDING PROTEIN ASSOCIATED FACTOR RNA POLYMERASE I SUBUNIT C |
| CAI8005262.1 | |
| CAI8005264.1 | TATA BOX-BINDING PROTEIN ASSOCIATED FACTOR RNA POLYMERASE I SUBUNIT C |
| CAI8005265.1 | |
| CAI8005266.1 | |
| CAI8005267.1 | |
| CAI8005268.1 | ACETYLGLUCOSAMINYLTRANSFERASE |
| CAI8005269.1 | ACETYLGLUCOSAMINYLTRANSFERASE |
| CAI8005270.1 |
