Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI7990410.1 | |
| CAI7990411.1 | |
| CAI7990412.1 | |
| CAI7990413.1 | |
| CAI7990414.1 | |
| CAI7990415.1 | LUCIFERASE-LIKE MONOOXYGENASE |
| CAI7990416.1 | |
| CAI7990417.1 | EPH RECEPTOR A5 |
| CAI7990418.1 | |
| CAI7990420.1 | NUCLEOREDOXIN |
| CAI7990419.1 | NUCLEOREDOXIN |
| CAI7990433.1 | UNKEMPT FAMILY MEMBER |
| CAI7990431.1 | UNKEMPT FAMILY MEMBER |
| CAI7990429.1 | |
| CAI7990427.1 | E3 UBIQUITIN-PROTEIN LIGASE RNF26 |
| CAI7990425.1 | |
| CAI7990438.1 | UNKEMPT FAMILY MEMBER |
| CAI7990436.1 | UNKEMPT FAMILY MEMBER |
| CAI7990440.1 | UNKEMPT FAMILY MEMBER |
| CAI7990442.1 | UNKEMPT FAMILY MEMBER |
| CAI7990444.1 | TOL-PAL SYSTEM PROTEIN TOLB |
| CAI7990446.1 | TOL-PAL SYSTEM PROTEIN TOLB |
| CAI7990448.1 | ANKYRIN REPEAT AND ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 |
| CAI7990450.1 | NO EXINE FORMATION 1 |
| CAI7990454.1 | SORTING NEXIN-29-RELATED |
| CAI7990452.1 | SORTING NEXIN-29-RELATED |
| CAI7990458.1 | SORTING NEXIN-29-RELATED |
| CAI7990456.1 | SORTING NEXIN-29-RELATED |
| CAI7990460.1 | SORTING NEXIN-29-RELATED |
| CAI7990462.1 | SORTING NEXIN-29-RELATED |
| CAI7990471.1 | SORTING NEXIN-29-RELATED |
| CAI7990475.1 | ATP-DEPENDENT RNA HELICASE RHLE-RELATED |
| CAI7990481.1 | ATP-DEPENDENT RNA HELICASE RHLE-RELATED |
| CAI7990483.1 | ATP-DEPENDENT RNA HELICASE RHLE-RELATED |
| CAI7990479.1 | ATP-DEPENDENT RNA HELICASE RHLE-RELATED |
| CAI7990477.1 | ATP-DEPENDENT RNA HELICASE RHLE-RELATED |
| CAI7990473.1 | ATP-DEPENDENT RNA HELICASE RHLE-RELATED |
| CAI7990487.1 | UNCHARACTERIZED |
| CAI7990489.1 | UNCHARACTERIZED |
| CAI7990485.1 | UNCHARACTERIZED |
| CAI7990493.1 | UNCHARACTERIZED |
| CAI7990491.1 | UNCHARACTERIZED |
| CAI7990495.1 | UNCHARACTERIZED |
| CAI7990497.1 | UNCHARACTERIZED |
| CAI7990501.1 | TETHER CONTAINING UBX DOMAIN FOR GLUT4 |
| CAI7990499.1 | TETHER CONTAINING UBX DOMAIN FOR GLUT4 |
| CAI7990503.1 | |
| CAI7990509.1 | HEPATOCYTE GROWTH FACTOR-REGULATED TYROSINE KINASE SUBSTRATE |
| CAI7990507.1 | HEPATOCYTE GROWTH FACTOR-REGULATED TYROSINE KINASE SUBSTRATE |
| CAI7990505.1 |
