About Pseudoliparis swirei

The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m,which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Pseudoliparis swireiChordatahadal snailfishDeep sea7,254the Mariana Trench (142°26′E, 11°07′N)2059687

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
NWPU_hadal_v1626.4MbChromosome2023JANBZZ01Northwestern Polytechnical UniversityPRJNA85295196.00%21,161

References
TitleJournalPubmed ID
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebratesElife38134226

Gene Information

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Gene IDDescription
HS08201ENOLASE
HS08202CARBONIC ANHYDRASE
HS08203CARBONIC ANHYDRASE
HS08204SOLUTE CARRIER FAMILY 2
HS08205G PROTEIN-COUPLED RECEPTOR 157-RELATED
HS08206SPRY DOMAIN CONTAINING SOCS BOX PROTEIN
HS08207MITOCHONDRIAL CARRIER PROTEIN RIM2
HS08208SRCR DOMAIN-CONTAINING PROTEIN
HS08209LAMINA-ASSOCIATED POLYPEPTIDE THYMOPOIETIN
HS08210
HS08211DEOXYRIBONUCLEASE
HS08212CENTROSOMAL PROTEIN OF 170 KDA
HS08213MITOCHONDRIAL ATP SYNTHASE B CHAIN
HS08214EPIDERMAL GROWTH FACTOR RECEPTOR KINASE SUBSTRATE EPS8-RELATED PROTEIN
HS08215GLUTATHIONE S-TRANSFERASE
HS08216AMP DEAMINASE
HS08217GTP-BINDING PROTEIN ALPHA SUBUNIT
HS08218G PROTEIN-COUPLED RECEPTOR
HS08219GTP-BINDING PROTEIN ALPHA SUBUNIT
HS08220AMPHOTERIN-INDUCED PROTEIN
HS08221ATAXIN 7 RELATED
HS08222SYNAPTOPHYSIN
HS08223SORTILIN RELATED
HS08224NEUGRIN
HS08225TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED
HS08226ADENOSYLHOMOCYSTEINASE
HS08227VOLTAGE-GATED POTASSIUM CHANNEL
HS08228SODIUM/CHLORIDE DEPENDENT TRANSPORTER
HS08229HOMEOBOX PROTEIN ARISTALESS
HS08230RNA RECOGNITION MOTIF-CONTAINING
HS08231MONOCARBOXYLATE TRANSPORTER
HS08232RAGULATOR COMPLEX PROTEIN LAMTOR5
HS08233PROKINETICIN
HS08234BETA-SITE APP-CLEAVING ENZYME, ISOFORM A-RELATED
HS08235
HS08236ZINC FINGER PROTEIN
HS08237MATRIX METALLOPROTEINASE
HS08238OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
HS08239REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
HS08240DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED
HS08241COPINE
HS08242LIPOMA HMGIC FUSION PARTNER-LIKE PROTEIN
HS08243PROTEIN KINASE DOMAIN-CONTAINING PROTEIN-RELATED
HS08244MITOGEN-ACTIVATED PROTEIN KINASE
HS08245PROTEIN CBG13728
HS08246
HS08247STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 5
HS08248DOWN REGULATED IN RENAL CARCINOMA 1/TU3A
HS08249COILED-COIL DOMAIN-CONTAINING PROTEIN 120 FAMILY MEMBER
HS08250RIBOSOMAL PROTEIN L7AE FAMILY MEMBER
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