The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m,which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Pseudoliparis swirei | Chordata | hadal snailfish | Deep sea | 7,254 | the Mariana Trench (142°26′E, 11°07′N) | 2059687 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
NWPU_hadal_v1 | 626.4Mb | Chromosome | 2023 | JANBZZ01 | Northwestern Polytechnical University | PRJNA852951 | 96.00% | 21,161 |
Title | Journal | Pubmed ID |
---|---|---|
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebrates | Elife | 38134226 |
Gene ID | Description |
---|---|
HS08101 | |
HS08102 | HISTONE H2A |
HS08103 | ACTIN |
HS08104 | NADH-UBIQUINONE OXIDOREDUCTASE MLRQ SUBUNIT |
HS08105 | SERINE HYDROXYMETHYLTRANSFERASE |
HS08106 | NEUREXOPHILIN |
HS08107 | ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4 |
HS08108 | STAC |
HS08109 | METHYL-CPG BINDING PROTEIN, DROSOPHILA |
HS08110 | CENTROMERE PROTEIN E |
HS08111 | PROTEIN-GLUTAMINE GAMMA-GLUTAMYLTRANSFERASE |
HS08112 | |
HS08113 | CYCLIN-DEPENDENT KINASE INHIBITOR-RELATED PROTEIN |
HS08114 | CALCIUM-SENSING RECEPTOR-RELATED |
HS08115 | BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, HES-RELATED |
HS08116 | BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, HES-RELATED |
HS08117 | BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, HES-RELATED |
HS08118 | E3 UBIQUITIN-PROTEIN LIGASE UBR4 |
HS08119 | UNCHARACTERIZED |
HS08120 | GENE 33 POLYPEPTIDE |
HS08121 | BILIVERDIN REDUCTASE A |
HS08122 | TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 10 |
HS08123 | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE |
HS08124 | COLD SHOCK DOMAIN CONTAINING PROTEINS |
HS08125 | GUANINE NUCLEOTIDE EXCHANGE FACTOR |
HS08126 | ESPIN |
HS08127 | BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, HES-RELATED |
HS08128 | BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, HES-RELATED |
HS08129 | ACYL COENZYME A THIOESTER HYDROLASE |
HS08130 | G-PROTEIN COUPLED RECEPTOR 153, 162 |
HS08131 | |
HS08132 | CALCIUM-SENSING RECEPTOR-RELATED |
HS08133 | PROTEIN RER1 |
HS08134 | CELLULAR TUMOR ANTIGEN P53 |
HS08135 | WD REPEAT PROTEIN 8-RELATED |
HS08136 | TUMOR PROTEIN P63-REGULATED GENE 1-LIKE PROTEIN |
HS08137 | CEREBELLIN-RELATED |
HS08138 | ZINC FINGER PROTEIN |
HS08139 | CHYMOTRYPSIN-LIKE ELASTASE FAMILY MEMBER |
HS08140 | CHYMOTRYPSIN-LIKE ELASTASE FAMILY MEMBER |
HS08141 | |
HS08142 | TRANSMEMBRANE PROTEIN 51 |
HS08143 | KAZRIN-RELATED |
HS08144 | KAZRIN-RELATED |
HS08145 | |
HS08146 | PR DOMAIN ZINC FINGER PROTEIN |
HS08147 | PODOPLANIN |
HS08148 | FORKHEAD BOX PROTEIN J2 FAMILY MEMBER |
HS08149 | ENDOTHELIN |
HS08150 | RIBOSOMAL PROTEIN S6 MODIFICATION PROTEIN |