The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m,which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Pseudoliparis swirei | Chordata | hadal snailfish | Deep sea | 7,254 | the Mariana Trench (142°26′E, 11°07′N) | 2059687 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
NWPU_hadal_v1 | 626.4Mb | Chromosome | 2023 | JANBZZ01 | Northwestern Polytechnical University | PRJNA852951 | 96.00% | 21,161 |
Title | Journal | Pubmed ID |
---|---|---|
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebrates | Elife | 38134226 |
Gene ID | Description |
---|---|
HS08051 | RHO FAMILY GTPASE |
HS08052 | SEMAPHORIN |
HS08053 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
HS08054 | UNCHARACTERIZED |
HS08055 | HYALURONIDASE |
HS08056 | DNA REPAIR PROTEIN XP-C / RAD4 |
HS08057 | RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING |
HS08058 | INOSINE-5-MONOPHOSPHATE DEHYDROGENASE RELATED |
HS08059 | |
HS08060 | DALRD3 PROTEIN |
HS08061 | RETROTRANSPOSON |
HS08062 | FAT ATYPICAL CADHERIN-RELATED |
HS08063 | |
HS08064 | WD REPEAT PROTEIN |
HS08065 | WD REPEAT PROTEIN |
HS08066 | SULFATE TRANSPORTER |
HS08067 | PHOSPHOLIPASE-RELATED |
HS08068 | CAMP-DEPENDENT PROTEIN KINASE REGULATORY CHAIN |
HS08069 | |
HS08070 | |
HS08071 | AMINOMETHYLTRANSFERASE |
HS08072 | INTERFERON-RELATED DEVELOPMENTAL REGULATOR |
HS08073 | SERINE PEPTIDASE S9 FAMILY MEMBER |
HS08074 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
HS08075 | SEMAPHORIN |
HS08076 | UNCHARACTERIZED |
HS08077 | |
HS08078 | SEMAPHORIN |
HS08079 | SELENOPROTEIN K |
HS08080 | ACTIN |
HS08081 | INTERLEUKIN-17 RECEPTOR |
HS08082 | GLUCOSE-METHANOL-CHOLINE GMC OXIDOREDUCTASE |
HS08083 | VOLTAGE-DEPENDENT CALCIUM CHANNEL TYPE A SUBUNIT ALPHA-1 |
HS08084 | |
HS08085 | TRANSCRIPTION FACTOR SMIF DECAPPING ENZYME DCP1 |
HS08086 | BACTERICIDAL PERMEABILITY-INCREASING BPI PROTEIN-RELATED |
HS08087 | MSF1/PX19 RELATED |
HS08088 | ATP SYNTHASE EPSILON CHAIN, MITOCHONDRIAL |
HS08089 | PIEZO-TYPE MECHANOSENSITIVE ION CHANNEL HOMOLOG |
HS08090 | PIEZO-TYPE MECHANOSENSITIVE ION CHANNEL HOMOLOG |
HS08091 | GTP-BINDING PROTEIN ALPHA SUBUNIT |
HS08092 | VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN |
HS08093 | CHARGED MULTIVESICULAR BODY PROTEIN |
HS08094 | EUKARYOTIC TRANSLATION INITIATION FACTOR |
HS08095 | RIBONUCLEOPROTEIN RB97D |
HS08096 | POLYCOMB GROUP PROTEIN |
HS08097 | RIBOSOMAL PROTEIN S6 KINASE |
HS08098 | MYB PROTEIN-RELATED |
HS08099 | NOP2 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING |
HS08100 |