About Pseudoliparis swirei

The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m，which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Pseudoliparis swireiChordatahadal snailfishDeep sea7,254the Mariana Trench (142°26′E, 11°07′N)2059687

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
NWPU_hadal_v1626.4MbChromosome2023JANBZZ01Northwestern Polytechnical UniversityPRJNA85295196.00%21,161

References
TitleJournalPubmed ID
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebratesElife38134226

Gene Information

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Gene IDDescription
HS07751DISKS LARGE-ASSOCIATED PROTEIN DAP SAP90/PSD-95-ASSOCIATED PROTEIN
HS07752PROTEIN CBG26694
HS07753BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, TWIST
HS07754REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
HS07755REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
HS07756
HS07757INTERFERON/INTERLEUKIN RECEPTOR
HS07758AGAP005440-PA
HS07759
HS07760UBIQUITIN-LIKE-CONJUGATING ENZYME ATG10
HS07761CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44)
HS07762REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
HS07763PKSB
HS07764
HS07765REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
HS07766PROENKEPHALIN
HS07767C-TYPE LECTIN DOMAIN FAMILY 20 MEMBER A-RELATED
HS07768REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
HS07769REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
HS07770GH28348P
HS07771
HS07772S-ADENOSYLMETHIONINE-DEPENDENT METHYLTRANSFERASE RELATED
HS07773TRANSMEMBRANE PROTEIN 68
HS07774XK-RELATED PROTEIN
HS07775NIBAN FAMILY MEMBER
HS07776KINESIN-ASSOCIATED PROTEINS
HS07777PHOSDUCIN-LIKE PROTEIN
HS07778TRANSCRIPTIONAL REPRESSOR PROTEIN YY
HS07779P140CAP/SNIP-RELATED
HS07780PAX TRANSCRIPTION ACTIVATION DOMAIN INTERACTING PROTEIN
HS07781HOMEOBOX PROTEIN ENGRAILED
HS07782MIR-INTERACTING SAPOSIN-LIKE PROTEIN
HS07783ASPARTYL/ASPARAGINYL BETA-HYDROXYLASE
HS07784DYNEIN INTERMEDIATE CHAIN
HS07785
HS07786ALPHA-TOCOPHEROL TRANSFER PROTEIN-RELATED
HS07787
HS07788XENOTROPIC AND POLYTROPIC RETROVIRUS RECEPTOR 1-RELATED
HS07789
HS07790ZINC FINGER PROTEIN
HS07791CYTOCHROME P450 FAMILY 7
HS07792KRUEPPEL-LIKE TRANSCRIPTION FACTOR
HS07793BILIVERDIN REDUCTASE A
HS07794CYTOCHROME C OXIDASE ASSEMBLY FACTOR 1 HOMOLOG
HS07795
HS07796PIKACHURIN-LIKE PROTEIN
HS07797MITOCHONDRIAL RIBOSOMAL PROTEIN L37
HS07798ACYL COENZYME A THIOESTER HYDROLASE
HS07799LIPID PHOSPHATE PHOSPHATASE
HS07800
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