The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m,which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Pseudoliparis swirei | Chordata | hadal snailfish | Deep sea | 7,254 | the Mariana Trench (142°26′E, 11°07′N) | 2059687 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
NWPU_hadal_v1 | 626.4Mb | Chromosome | 2023 | JANBZZ01 | Northwestern Polytechnical University | PRJNA852951 | 96.00% | 21,161 |
Title | Journal | Pubmed ID |
---|---|---|
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebrates | Elife | 38134226 |
Gene ID | Description |
---|---|
HS07551 | HYPOXANTHINE-GUANINE PHOSPHORIBOSYLTRANSFERASE |
HS07552 | PDZ DOMAIN-CONTAINING PROTEIN |
HS07553 | PROTEASE FAMILY S9B,C DIPEPTIDYL-PEPTIDASE IV-RELATED |
HS07554 | HL01030P-RELATED |
HS07555 | AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT |
HS07556 | BCL-2 RELATED |
HS07557 | 3-KETODIHYDROSPHINGOSINE REDUCTASE |
HS07558 | AAA DOMAIN-CONTAINING |
HS07559 | NETRIN/LAMININ-RELATED |
HS07560 | TETRATRICOPEPTIDE REPEAT PROTEIN 39 FAMILY MEMBER |
HS07561 | OXYSTEROL-BINDING PROTEIN-RELATED |
HS07562 | ANKYRIN REPEAT FAMILY PROTEIN |
HS07563 | 5-HYDROXYTRYPTAMINE RECEPTOR |
HS07564 | |
HS07565 | TRANSCRIPTIONAL REPRESSOR CTCFL-RELATED |
HS07566 | |
HS07567 | SYNOVIAL SARCOMA ASSOCIATED SS18 PROTEIN |
HS07568 | PROTEASOME SUBUNIT ALPHA/BETA |
HS07569 | POTASSIUM CHANNEL TETRAMERIZATION DOMAIN-CONTAINING |
HS07570 | AQUAPORIN TRANSPORTER |
HS07571 | CADHERIN-23 |
HS07572 | CADHERIN-23 |
HS07573 | DESMOGLEIN FAMILY MEMBER |
HS07574 | TUBULIN |
HS07575 | SOLUTE CARRIER FAMILY 22 MEMBER |
HS07576 | ENVOPLAKIN |
HS07577 | TENSIN |
HS07578 | |
HS07579 | INSULIN-LIKE GROWTH FACTOR BINDING PROTEIN |
HS07580 | INSULIN-LIKE GROWTH FACTOR BINDING PROTEIN |
HS07581 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
HS07582 | ADENYLATE CYCLASE TYPE 1 |
HS07583 | NAD-DEPENDENT PROTEIN DEACYLASE SIRTUIN-5, MITOCHONDRIAL-RELATED |
HS07584 | PHOSPHATASE AND ACTIN REGULATOR PHACTR |
HS07585 | - |
HS07586 | |
HS07587 | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED |
HS07588 | GOLGI REASSEMBLY STACKING PROTEIN GRASP |
HS07589 | GLUTAMATE DECARBOXYLASE-RELATED |
HS07590 | UNCHARACTERIZED |
HS07591 | MITOCHONDRIAL DICARBOXYLATE CARRIER-RELATED |
HS07592 | G_PROTEIN_RECEP_F1_2 DOMAIN-CONTAINING PROTEIN |
HS07593 | ETS |
HS07594 | PROTEIN SGT1 HOMOLOG |
HS07595 | CHONDROMODULIN-RELATED |
HS07596 | CADHERIN-87A |
HS07597 | RGD1565685 PROTEIN |
HS07598 | |
HS07599 | |
HS07600 | CASPASE |