About Pseudoliparis swirei

The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m,which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Pseudoliparis swireiChordatahadal snailfishDeep sea7,254the Mariana Trench (142°26′E, 11°07′N)2059687

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
NWPU_hadal_v1626.4MbChromosome2023JANBZZ01Northwestern Polytechnical UniversityPRJNA85295196.00%21,161

References
TitleJournalPubmed ID
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebratesElife38134226

Gene Information

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Gene IDDescription
HS07401MITOCHONDRIAL 2-OXODICARBOXYLATE CARRIER 1-RELATED
HS07402INTEGRIN ALPHA
HS07403NEURABIN
HS07404GUANINE NUCLEOTIDE EXCHANGE FACTOR
HS07405SERINE-THREONINE PROTEIN KINASE
HS07406DYNEIN HEAVY CHAIN
HS07407
HS07408EPH RECEPTOR A5
HS07409PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE
HS07410GLUTATHIONE PEROXIDASE
HS07411C2 DOMAIN-CONTAINING PROTEIN
HS07412ANKYRIN REPEAT CONTAINING
HS07413PROTEIN SIDEKICK
HS07414GRAM DOMAIN-CONTAINING PROTEIN 2B-RELATED
HS07415ALPHA/BETA HYDROLASE DOMAIN-CONTAINING PROTEIN
HS07416SEMAPHORIN
HS07417G-PROTEIN COUPLED RECEPTOR
HS07418NUCLEAR HORMONE RECEPTOR HR3-RELATED
HS07419SH3 DOMAIN-CONTAINING
HS07420SEMAPHORIN
HS07421POLYGLUTAMINE BINDING PROTEIN 1/MARVEL MEMBRANE-ASSOCIATING DOMAIN CONTAINING 3
HS07422UBIQUITIN-CONJUGATING ENZYME E2
HS07423
HS07424NAD-DEPENDENT PROTEIN DEACYLASE SIRTUIN-5, MITOCHONDRIAL-RELATED
HS07425AGAP001464-PB
HS07426TRANSLATION ELONGATION FACTOR-RELATED
HS07427BTB/POZ DOMAIN-CONTAINING
HS07428PROTEIN UNC-13 HOMOLOG
HS07429RING FINGER AND KH DOMAIN CONTAINING PROTEIN 1
HS07430METHYL-CPG BINDING PROTEIN, MBD
HS07431BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR
HS07432TRANSCRIPTION FACTOR ONECUT
HS07433SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
HS07434
HS07435SPLICING FACTOR 3A SUBUNIT 2
HS07436SESQUIPEDALIAN
HS07437CELL DIVISION CYCLE 20 CDC20 FIZZY -RELATED
HS07438SPINDLIN
HS07439I[[H]] CHANNEL, ISOFORM E
HS07440E3 UBIQUITIN-PROTEIN LIGASE PRAJA
HS07441ARGININE/SERINE RICH SPLICING FACTOR SF4/14
HS07442CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED
HS07443VOLTAGE-DEPENDENT CALCIUM CHANNEL BETA SUBUNIT-ASSOCIATED REGULATORY PROTEIN
HS07444MIDNOLIN
HS07445TRANSFORMER-2 SEX-DETERMINING PROTEIN-RELATED
HS07446NADH DEHYDROGENASE UBIQUINONE 1 ALPHA SUBCOMPLEX SUBUNIT 13
HS07447TRANSCRIPTIONAL REPRESSOR P66-RELATED
HS07448
HS07449UNCHARACTERIZED
HS07450SOLUTE CARRIER FAMILY 25
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