The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m,which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Pseudoliparis swirei | Chordata | hadal snailfish | Deep sea | 7,254 | the Mariana Trench (142°26′E, 11°07′N) | 2059687 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
NWPU_hadal_v1 | 626.4Mb | Chromosome | 2023 | JANBZZ01 | Northwestern Polytechnical University | PRJNA852951 | 96.00% | 21,161 |
Title | Journal | Pubmed ID |
---|---|---|
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebrates | Elife | 38134226 |
Gene ID | Description |
---|---|
HS07101 | APOLIPOPROTEIN D |
HS07102 | POLYCOMB GROUP PROTEIN |
HS07103 | TRANSLOCATION PROTEIN SEC62 |
HS07104 | NAD KINASE |
HS07105 | G-PROTEIN COUPLED RECEPTOR 160-RELATED |
HS07106 | SKI ONCOGENE-RELATED |
HS07107 | RIBOSOMAL PROTEIN S6 KINASE |
HS07108 | POLYCOMB GROUP PROTEIN |
HS07109 | SERINE/THREONINE-PROTEIN KINASE 17 |
HS07110 | SIGNAL PEPTIDE PEPTIDASE |
HS07111 | AGAP007712-PA |
HS07112 | TYROSINE-PROTEIN KINASE RECEPTOR |
HS07113 | MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10 |
HS07114 | UNCONVENTIONAL MYOSIN-IXB-LIKE PROTEIN |
HS07115 | - |
HS07116 | LYSYL OXIDASE-LIKE-RELATED |
HS07117 | BNIP - RELATED |
HS07118 | URIDINE KINASE |
HS07119 | B-BOX DOMAIN CONTAINING |
HS07120 | ZINC FINGER PROTEIN |
HS07121 | SODIUM/DICARBOXYLATE SYMPORTER-RELATED |
HS07122 | HOMEOBOX PROTEIN, PUTATIVE-RELATED |
HS07123 | CALRETICULIN AND CALNEXIN |
HS07124 | EH DOMAIN |
HS07125 | KRUEPPEL-LIKE TRANSCRIPTION FACTOR |
HS07126 | AP COMPLEX SUBUNIT MU |
HS07127 | TROPOMYOSIN |
HS07128 | LD44762P |
HS07129 | CALCIUM AND INTEGRIN BINDING FAMILY MEMBER 2 |
HS07130 | RAN BINDING PROTEIN |
HS07131 | GDNF SUBFAMILY OF TGF-BETA FAMILY |
HS07132 | CYTOKINE RECEPTOR |
HS07133 | OVOCHYMASE-RELATED |
HS07134 | TRANSCRIPTION FACTOR S-II ZINC FINGER DOMAIN-CONTAINING PROTEIN |
HS07135 | TRANSMEMBRANE PROTEIN 59-LIKE PROTEIN |
HS07136 | LEUCINE-RICH REPEAT-CONTAINING PROTEIN 42 |
HS07137 | UNCHARACTERIZED |
HS07138 | |
HS07139 | UNCHARACTERIZED |
HS07140 | WD REPEAT DOMAIN-CONTAINING FAMILY |
HS07141 | PROTEIN VAV |
HS07142 | |
HS07143 | NETRIN/LAMININ-RELATED |
HS07144 | ALPHA-AMYLASE |
HS07145 | COLLAGEN ALPHA |
HS07146 | OLFACTOMEDIN-RELATED |
HS07147 | SPERMATHECAL PHYSIOLOGY VARIANT |
HS07148 | TRANSFORMING GROWTH FACTOR-BETA RECEPTOR TYPE I AND II |
HS07149 | BETA/GAMMA CRYSTALLIN |
HS07150 |