About Pseudoliparis swirei

The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m,which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Pseudoliparis swireiChordatahadal snailfishDeep sea7,254the Mariana Trench (142°26′E, 11°07′N)2059687

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
NWPU_hadal_v1626.4MbChromosome2023JANBZZ01Northwestern Polytechnical UniversityPRJNA85295196.00%21,161

References
TitleJournalPubmed ID
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebratesElife38134226

Gene Information

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Gene IDDescription
HS07201DUAL SPECIFICITY PROTEIN PHOSPHATASE DDB_G0269404-RELATED
HS07202MIXED LINEAGE PROTEIN KINASE
HS07203MYOSIN VII, XV
HS07204RIBONUCLEASE
HS07205
HS07206ANNEXIN
HS07207NEL HOMOLOG
HS07208GROWTH FACTOR RECEPTOR-BOUND PROTEIN
HS07209ABL INTERACTOR FAMILY MEMBER
HS07210ACYL-COA-BINDING PROTEIN, ACBP
HS07211METALLOPROTEASE M41 FTSH
HS07212PATCHED-RELATED
HS07213RAS-RELATED PROTEIN RAB
HS07214IROQUOIS-CLASS HOMEODOMAIN PROTEIN IRX
HS07215MEMBRANE-ASSOCIATED GUANYLATE KINASE MAGUK
HS07216WW DOMAIN-CONTAINING ADAPTER PROTEIN WITH COILED-COIL
HS07217OPSIN
HS07218GENE 33 POLYPEPTIDE
HS07219N-ACETYLATED-ALPHA-LINKED ACIDIC DIPEPTIDASE
HS07220UNCHARACTERIZED
HS07221LP21163P
HS07222FIVE-SPAN TRANSMEMBRANE PROTEIN M83
HS07223-
HS07224LIPID PHOSPHATE PHOSPHATASE
HS07225SH2 CONTAINING ADAPTOR PRAM-1 RELATED
HS07226COMPLEMENT COMPONENT C6
HS07227COMPLEMENT COMPONENT C6
HS07228PID DOMAIN-CONTAINING PROTEIN
HS07229MEMBRANE PROTEIN CH1 RELATED
HS07230DYNAMIN
HS07231MCG48959-RELATED
HS07232OLFACTOMEDIN-RELATED
HS07233RIBULOKINASE
HS07234JUN TRANSCRIPTION FACTOR-RELATED
HS07235TRANSCRIPTIONAL ADAPTER 1
HS07236FIBRINOGEN/TENASCIN/ANGIOPOEITIN
HS07237GH08155P
HS07238MICROSOMAL GLUTATHIONE S-TRANSFERASE
HS07239
HS07240TRANSPORTIN 3 AND IMPORTIN 13
HS07241CELL DIVISION CYCLE 20 CDC20 FIZZY -RELATED
HS07242CYCLIC NUCLEOTIDE PHOSPHODIESTERASE
HS07243LEPTIN RECEPTOR-RELATED
HS07244PHOSPHOHEXOMUTASE FAMILY MEMBER
HS07245FIBRINOGEN/TENASCIN/ANGIOPOEITIN
HS07246SI:CH211-196P9.1-RELATED
HS07247KN MOTIF AND ANKYRIN REPEAT DOMAIN-CONTAINING
HS07248LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED
HS07249TRANSMEMBRANE PROTEIN 125
HS07250ACETYL-COA C-ACETYLTRANSFERASE
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