About Pseudoliparis swirei

The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m,which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Pseudoliparis swireiChordatahadal snailfishDeep sea7,254the Mariana Trench (142°26′E, 11°07′N)2059687

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
NWPU_hadal_v1626.4MbChromosome2023JANBZZ01Northwestern Polytechnical UniversityPRJNA85295196.00%21,161

References
TitleJournalPubmed ID
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebratesElife38134226

Gene Information

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Gene IDDescription
HS07251UNCHARACTERIZED
HS07252URIDINE KINASE
HS07253ALDEHYDE DEHYDROGENASE-RELATED
HS07254HORMA DOMAIN-CONTAINING PROTEIN 1
HS07255THIOREDOXIN PEROXIDASE
HS07256NUCLEAR AUTOANTIGENIC SPERM PROTEIN NASP -RELATED
HS07257VASCULIN
HS07258TRANSMEMBRANE PROTEIN 69
HS07259LD33804P
HS07260PHOSPHATIDYLINOSITOL 3-KINASE REGULATORY SUBUNIT
HS07261PROLINE-SERINE-THREONINE PHOSPHATASE INTERACTING PROTEIN 1
HS07262T-COMPLEX-ASSOCIATED-TESTIS-EXPRESSED 1/ DYNEIN LIGHT CHAIN
HS07263ILGF DOMAIN-CONTAINING PROTEIN
HS07264METASTASIS-ASSOCIATED PROTEIN AND MESODERM INDUCTION EARLY RESPONSE PROTEIN
HS07265SOLUTE CARRIER FAMILY 35
HS07266HYALURONIC ACID-BINDING PROTEIN 4
HS072673-KETO-STEROID REDUCTASE
HS07268TYROSINE-PROTEIN KINASE RECEPTOR
HS07269PHOSPHOTYROSINE INTERACTION DOMAIN-CONTAINING FAMILY MEMBER
HS07270REGULATOR OF G PROTEIN SIGNALING
HS07271MACPF DOMAIN-CONTAINING PROTEIN
HS07272REGULATOR OF G PROTEIN SIGNALING
HS07273REGULATOR OF G PROTEIN SIGNALING
HS07274CDC73 DOMAIN PROTEIN
HS07275BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE
HS07276COMPLEMENT FACTOR H-RELATED
HS07277FINGER PUTATIVE TRANSCRIPTION FACTOR FAMILY-RELATED
HS07278CRUMBS FAMILY MEMBER
HS07279SENTRIN/SUMO-SPECIFIC PROTEASE
HS07280FETUIN
HS07281PROFILIN
HS07282TSC22 DOMAIN FAMILY PROTEIN 2
HS07283
HS07284G-PROTEIN COUPLED RECEPTOR
HS07285
HS07286EPH RECEPTOR A5
HS07287INNER MEMBRANE TRANSPORT PROTEIN YAJR
HS07288CALCIUM-ACTIVATED POTASSIUM CHANNEL SUBUNIT BETA
HS07289PHOSPHATIDYLINOSITOL KINASE
HS07290CALCIUM-ACTIVATED POTASSIUM CHANNEL SUBUNIT BETA
HS07291WD40 REPEAT PROTEIN
HS07292BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE
HS07293ATP-DEPENDENT RNA HELICASE DBP3
HS07294C5ORF35
HS07295AGOUTI RELATED
HS07296RP42 RELATED
HS07297COILED-COIL DOMAIN-CONTAINING PROTEIN 39
HS07298AMINO ACID TRANSPORTER
HS07299SERINE-THREONINE PROTEIN KINASE
HS07300AGAP008810-PA
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