About Pseudoliparis swirei

The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m,which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Pseudoliparis swireiChordatahadal snailfishDeep sea7,254the Mariana Trench (142°26′E, 11°07′N)2059687

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
NWPU_hadal_v1626.4MbChromosome2023JANBZZ01Northwestern Polytechnical UniversityPRJNA85295196.00%21,161

References
TitleJournalPubmed ID
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebratesElife38134226

Gene Information

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Gene IDDescription
HS07501RING FINGER AND CCCH-TYPE ZINC FINGER DOMAIN-CONTAINING PROTEIN
HS07502PAR-6-RELATED
HS07503PAR-6-RELATED
HS07504T-CELL ACUTE LYMPHOCYTIC LEUKEMIA/STEM CELL LEUKEMIA-RELATED
HS07505EMILIN ELASTIN MICROFIBRIL INTERFACE-LOCATED PROTEIN ELASTIN MICROFIBRIL INTERFACER
HS07506PROTEIN PHOSPHATASE
HS07507ADP RIBOSYLATION FACTOR-RELATED
HS07508ZONA PELLUCIDA SPERM-BINDING PROTEIN 3
HS07509
HS07510SCHWANNOMIN INTERACTING PROTEIN 1
HS07511SELENOPROTEIN T
HS07512KINESIN-RELATED PROTEIN 6
HS07513PROTEIN PATCHED
HS07514TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT GAMMA
HS07515SERINE/THREONINE-PROTEIN KINASE PLK
HS07516CALICYLIN BINDING PROTEIN
HS0751730S RIBOSOMAL PROTEIN S14
HS07518TENASCIN
HS07519-
HS07520TENASCIN
HS07521KRAB AND ZINC FINGER DOMAIN-CONTAINING
HS07522ANGIOMOTIN
HS07523RAS-RELATED PROTEIN RAB
HS07524ESPIN
HS07525ESPIN
HS07526STAR-RELATED LIPID TRANSFER PROTEIN 9
HS07527AMINOTRANSFERASE CLASS V
HS07528THAP4 PROTEIN
HS07529BCL-2 RELATED
HS07530FATTY ACID ACYL TRANSFERASE-RELATED
HS07531CELL DIVISION CYCLE 20 CDC20 FIZZY -RELATED
HS07532
HS07533PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT SDS22-RELATED
HS07534FAS-ASSOCIATED PROTEIN
HS07535TRANSFERRIN
HS07536ZINC FINGER CCHC DOMAIN-CONTAINING PROTEIN 7
HS07537EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA
HS07538PROTEIN FAM131B-RELATED
HS07539ZONA PELLUCIDA SPERM-BINDING PROTEIN
HS07540SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS
HS07541ZINC FINGER AND BTB DOMAIN-CONTAINING
HS07542PERIOD CIRCADIAN PROTEIN
HS07543BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, HES-RELATED
HS07544INTEGRAL TRANSMEMBRANE PROTEIN 2
HS07545G-PROTEIN COUPLED RECEPTOR
HS07546PROTEIN SNORC
HS07547KINOCILIN
HS07548
HS07549GLUTAMINE SYNTHETASE
HS07550HOMEOBOX PROTEIN TRANSCRIPTION FACTORS
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