About Pseudoliparis swirei

The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m，which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Pseudoliparis swireiChordatahadal snailfishDeep sea7,254the Mariana Trench (142°26′E, 11°07′N)2059687

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
NWPU_hadal_v1626.4MbChromosome2023JANBZZ01Northwestern Polytechnical UniversityPRJNA85295196.00%21,161

References
TitleJournalPubmed ID
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebratesElife38134226

Gene Information

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Gene IDDescription
HS07651SIMILAR TO 1700123O20RIK PROTEIN
HS07652DEHYDROGENASE/REDUCTASE SDR FAMILY MEMBER 1
HS07653ZINC-FINGERS AND HOMEOBOXES RELATED
HS07654UNCHARACTERIZED
HS07655ZONA PELLUCIDA SPERM-BINDING PROTEIN 3
HS07656ZONA PELLUCIDA SPERM-BINDING PROTEIN 3
HS07657ZONA PELLUCIDA SPERM-BINDING PROTEIN 3
HS07658ZONA PELLUCIDA SPERM-BINDING PROTEIN 3
HS07659ZONA PELLUCIDA SPERM-BINDING PROTEIN 3
HS07660UBIQUITIN
HS07661ADAPTIN, ALPHA/GAMMA/EPSILON
HS07662AMINO ACID TRANSPORTER
HS07663PROTEIN ARGININE N-METHYLTRANSFERASE 5
HS07664METALLOPROTEASE TLDD
HS07665METALLOPROTEASE TLDD
HS07666CADHERIN-23
HS07667REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
HS07668LEUCINE-RICH REPEAT, ISOFORM F-RELATED
HS07669REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
HS07670LEUCOKININ RECEPTOR-RELATED
HS07671RAD, GEM/KIR FAMILY MEMBER 2, ISOFORM C
HS07672NUCLEOLAR PROTEIN 9
HS07673PROTEIN-GLUTAMINE GAMMA-GLUTAMYLTRANSFERASE
HS07674RE40534P-RELATED
HS07675DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT DAD1
HS07676POLYMERIC-IMMUNOGLOBULIN RECEPTOR
HS07677SYNAPTIC ADHESION-LIKE MOLECULE SALM
HS07678SODIUM/CHLORIDE DEPENDENT TRANSPORTER
HS07679KRUEPPEL-LIKE TRANSCRIPTION FACTOR
HS07680REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
HS07681UNCHARACTERIZED
HS07682UNCHARACTERIZED
HS07683POLY A -SPECIFIC RIBONUCLEASE/TARGET OF EGR1, MEMBER 1
HS07684THAP DOMAIN-CONTAINING
HS07685SELENOPROTEIN P
HS07686FATTY ACID BINDING PROTEIN
HS07687ZINC FINGER SWIM DOMAIN CONTAINING PROTEIN 4, 5, 6
HS07688METHYLTETRAHYDROFOLATE:HOMOCYSTEINE METHYLTRANSFERASE RELATED
HS07689TYROSINE-PROTEIN KINASE RECEPTOR
HS07690TYROSINE-PROTEIN KINASE
HS07691REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
HS07692
HS07693PROTEIN CBG26694
HS07694ENZYMATIC POLYPROTEIN-RELATED
HS07695PLAKOPHILLIN-RELATED
HS07696SI:CH211-196P9.1-RELATED
HS07697SSM4 PROTEIN
HS07698UNCHARACTERIZED
HS07699OVOCHYMASE-RELATED
HS07700LCCL DOMAIN PROTEIN (AFU_ORTHOLOGUE AFUA_5G08630)
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