About Pseudoliparis swirei

The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m，which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Pseudoliparis swireiChordatahadal snailfishDeep sea7,254the Mariana Trench (142°26′E, 11°07′N)2059687

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
NWPU_hadal_v1626.4MbChromosome2023JANBZZ01Northwestern Polytechnical UniversityPRJNA85295196.00%21,161

References
TitleJournalPubmed ID
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebratesElife38134226

Gene Information

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Gene IDDescription
HS07601RIIA DOMAIN-CONTAINING PROTEIN 1
HS07602DED DOMAIN-CONTAINING PROTEIN
HS07603BAX INHIBITOR-RELATED
HS07604
HS07605DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER
HS07606CELL ADHESION MOLECULE
HS07607
HS07608EG:EG0003.4 PROTEIN-RELATED
HS07609NADH-UBIQUINONE OXIDOREDUCTASE B12 SUBUNIT
HS07610PEROXISOMAL TRANS-2-ENOYL-COA REDUCTASE
HS0761160S RIBOSOMAL PROTEIN L43
HS07612LEUCINE RICH REPEAT PROTEIN
HS07613ORIGIN RECOGNITION COMPLEX SUBUNIT 2
HS07614ZGC:162816-RELATED
HS07615COLLAGEN ALPHA
HS07616ZONA PELLUCIDA SPERM-BINDING PROTEIN 3
HS07617ZONA PELLUCIDA SPERM-BINDING PROTEIN 3
HS07618ZONA PELLUCIDA SPERM-BINDING PROTEIN 3
HS07619ZONA PELLUCIDA SPERM-BINDING PROTEIN 3
HS07620COLLAGEN ALPHA
HS07621ZINC FINGER PROTEIN
HS07622ZINC FINGER PROTEIN ZIC AND GLI
HS07623VOLTAGE-GATED CATION CHANNEL CALCIUM AND SODIUM
HS07624WD REPEAT-CONTAINING PROTEIN 48
HS07625GOLGI REASSEMBLY STACKING PROTEIN GRASP
HS07626TGF-BETA INDUCED APOPTOSIS PROTEIN
HS07627XIN
HS07628OS06G0237300 PROTEIN
HS07629SOLUTE CARRIER FAMILY 22 MEMBER
HS07630SOLUTE CARRIER FAMILY 22 MEMBER
HS07631SOLUTE CARRIER FAMILY 22 MEMBER
HS07632STERILE20-LIKE KINASE, ISOFORM B-RELATED
HS07633PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN
HS07634DULLARD PROTEIN PHOSPHATASE
HS07635ACYLTRANSFERASE
HS07636KELCH PROTEIN
HS07637PDF RECEPTOR-LIKE PROTEIN-RELATED
HS07638MITOCHONDRIAL UBIQUITIN LIGASE ACTIVATOR OF NFKB 1
HS07639TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT EPSILON
HS07640ADP-RIBOSYLGLYCOHYDROLASE
HS07641CALSEQUESTRIN
HS07642ZINC FINGER AND SCAN DOMAIN-CONTAINING
HS07643B-BOX DOMAIN CONTAINING
HS07644AGAP000281-PA
HS07645CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 9
HS07646CEREBELLIN-RELATED
HS07647B-BOX DOMAIN CONTAINING
HS07648SAL-LIKE PROTEIN
HS07649MATRIX METALLOPROTEINASE
HS07650APOPTOTIC CHROMATIN CONDENSATION INDUCER IN THE NUCLEUS
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