About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_008274-T1TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN
LLU|FUN_008275-T1DEOXYRIBONUCLEASE
LLU|FUN_008276-T1
LLU|FUN_008277-T1
LLU|FUN_008278-T1GROUP II PYRIDOXAL-5-PHOSPHATE DECARBOXYLASE
LLU|FUN_008279-T1
LLU|FUN_008280-T1GROUP II PYRIDOXAL-5-PHOSPHATE DECARBOXYLASE
LLU|FUN_008281-T1
LLU|FUN_008282-T1
LLU|FUN_008283-T1
LLU|FUN_008284-T1RHO GTPASE ACTIVATING PROTEIN 18,19-RELATED
LLU|FUN_008285-T1
LLU|FUN_008286-T1
LLU|FUN_008287-T1ANAPHASE PROMOTING COMPLEX SUBUNIT 4 APC4
LLU|FUN_008288-T1ALDO/KETO REDUCTASE
LLU|FUN_008289-T1ZINC FINGER PROTEIN 142
LLU|FUN_008290-T1ENOLASE
LLU|FUN_008291-T1CENTAURIN/ARF
LLU|FUN_008292-T1SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
LLU|FUN_008293-T1
LLU|FUN_008294-T1
LLU|FUN_008295-T1
LLU|FUN_008296-T1PROTEIN SIDEKICK
LLU|FUN_008297-T1
LLU|FUN_008298-T1
LLU|FUN_008299-T1
LLU|FUN_008300-T1
LLU|FUN_008301-T1
LLU|FUN_008302-T1
LLU|FUN_008303-T1
LLU|FUN_008304-T1
LLU|FUN_008305-T1
LLU|FUN_008306-T1
LLU|FUN_008307-T1
LLU|FUN_008308-T1CALCIUM-ACTIVATED CHLORIDE CHANNEL REGULATOR
LLU|FUN_008309-T1
LLU|FUN_008310-T1NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
LLU|FUN_008311-T1PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT SDS22-RELATED
LLU|FUN_008312-T1
LLU|FUN_008313-T1
LLU|FUN_008314-T1NEUROTRANSMITTER GATED ION CHANNEL
LLU|FUN_008315-T1
LLU|FUN_008316-T1
LLU|FUN_008317-T1SIGNAL PEPTIDASE COMPLEX CATALYTIC SUBUNIT SEC11
LLU|FUN_008318-T1
LLU|FUN_008319-T1
LLU|FUN_008320-T1
LLU|FUN_008321-T1
LLU|FUN_008322-T1-
LLU|FUN_008323-T1-
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