About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_008121-T1ANION EXCHANGE PROTEIN
LLU|FUN_008122-T1HYALURONIC ACID-BINDING PROTEIN 4
LLU|FUN_008123-T1ZINC FINGER PROTEIN
LLU|FUN_008124-T1TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT BETA
LLU|FUN_008125-T1MITOCHONDRIAL RIBOSOME PROTEIN L39/PROLYL-TRNA LIGASE FAMILY MEMBER
LLU|FUN_008126-T1CLASS II AMINOTRANSFERASE/8-AMINO-7-OXONONANOATE SYNTHASE
LLU|FUN_008127-T1
LLU|FUN_008128-T1
LLU|FUN_008129-T1
LLU|FUN_008130-T1NCK-ASSOCIATED PROTEIN 5
LLU|FUN_008131-T1UNCHARACTERIZED
LLU|FUN_008132-T1MITOTIC-SPINDLE ORGANIZING PROTEIN 1
LLU|FUN_008133-T1IMMUNOGLOBULIN
LLU|FUN_008134-T1
LLU|FUN_008135-T1
LLU|FUN_008138-T1DNAJ HOMOLOG SUBFAMILY C MEMBER 5 HOMOLOG
LLU|FUN_008139-T14-NITROPHENYLPHOSPHATASE-RELATED
LLU|FUN_008140-T1
LLU|FUN_008141-T1
LLU|FUN_008142-T1AMNIONLESS
LLU|FUN_008143-T1SQUAMOUS CELL CARCINOMA ANTIGEN RECOGNISED BY CYTOTOXIC T LYMPHOCYTES
LLU|FUN_008144-T1
LLU|FUN_008145-T1
LLU|FUN_008146-T1
LLU|FUN_008147-T1
LLU|FUN_008148-T1TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL, SUBFAMILY M, MEMBER 6
LLU|FUN_008149-T1
LLU|FUN_008150-T1
LLU|FUN_008151-T1
LLU|FUN_008152-T1
LLU|FUN_008153-T1
LLU|FUN_008154-T1
LLU|FUN_008155-T1
LLU|FUN_008156-T1
LLU|FUN_008157-T1
LLU|FUN_008158-T1ACROSIN-RELATED
LLU|FUN_008159-T1CYTOCHROME C OXIDASE POLYPEPTIDE VIC-2
LLU|FUN_008160-T1
LLU|FUN_008161-T1
LLU|FUN_008162-T1
LLU|FUN_008163-T1
LLU|FUN_008164-T1
LLU|FUN_008165-T1
LLU|FUN_008166-T1
LLU|FUN_008167-T1METHYLTRANSFERASE, FKBM FAMILY PROTEIN
LLU|FUN_008168-T1
LLU|FUN_008169-T1OS10G0105400 PROTEIN
LLU|FUN_008170-T1OS10G0105400 PROTEIN
LLU|FUN_008171-T1
LLU|FUN_008172-T1
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