About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_007917-T1
LLU|FUN_007918-T1
LLU|FUN_007919-T1
LLU|FUN_007920-T1
LLU|FUN_007921-T1
LLU|FUN_007922-T1PROLINE-RICH TRANSMEMBRANE PROTEIN 4-RELATED
LLU|FUN_007923-T1
LLU|FUN_007924-T1LEUCINE-RICH REPEAT-CONTAINING PROTEIN 34
LLU|FUN_007925-T1OVOCHYMASE-RELATED
LLU|FUN_007926-T1GLYCOPROTEIN HORMONE RECEPTOR
LLU|FUN_007927-T1
LLU|FUN_007928-T1G-PROTEIN COUPLED RECEPTOR
LLU|FUN_007929-T1G-PROTEIN COUPLED RECEPTOR
LLU|FUN_007930-T1G-PROTEIN COUPLED RECEPTOR
LLU|FUN_007931-T1G-PROTEIN COUPLED RECEPTOR
LLU|FUN_007933-T1
LLU|FUN_007936-T1
LLU|FUN_007937-T1
LLU|FUN_007938-T1
LLU|FUN_007939-T1G-PROTEIN COUPLED RECEPTOR
LLU|FUN_007940-T1
LLU|FUN_007941-T1
LLU|FUN_007942-T1
LLU|FUN_007943-T1
LLU|FUN_007944-T1
LLU|FUN_007945-T1TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED
LLU|FUN_007946-T1FMRFAMIDE RECEPTOR-RELATED
LLU|FUN_007947-T1
LLU|FUN_007948-T1
LLU|FUN_007949-T1
LLU|FUN_007950-T1OS10G0105400 PROTEIN
LLU|FUN_007951-T1
LLU|FUN_007952-T1
LLU|FUN_007953-T1
LLU|FUN_007954-T1SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER
LLU|FUN_007955-T1SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER
LLU|FUN_007956-T1HAUS AUGMIN-LIKE COMPLEX SUBUNIT 2
LLU|FUN_007957-T1IONOTROPIC GLUTAMATE RECEPTOR
LLU|FUN_007958-T1
LLU|FUN_007959-T1
LLU|FUN_007960-T1THIOREDOXIN DOMAIN-CONTAINING PROTEIN 11
LLU|FUN_007961-T1
LLU|FUN_007962-T1NEPHRIN
LLU|FUN_007963-T1
LLU|FUN_007964-T1TORSIN-1A-INTERACTING PROTEIN
LLU|FUN_007965-T1DNA-DIRECTED RNA POLYMERASES III 80 KDA POLYPEPTIDE RNA POLYMERASE III SUBUNIT 5
LLU|FUN_007966-T1UPF0449 PROTEIN C19ORF25
LLU|FUN_007967-T1COILED-COIL DOMAIN-CONTAINING PROTEIN 151
LLU|FUN_007968-T1
LLU|FUN_007969-T1MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
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