About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_007767-T1
LLU|FUN_007768-T1REPETIN
LLU|FUN_007769-T1SPERMATHECAL PHYSIOLOGY VARIANT
LLU|FUN_007770-T1
LLU|FUN_007771-T1SPERMATHECAL PHYSIOLOGY VARIANT
LLU|FUN_007772-T1CXC DOMAIN-CONTAINING PROTEIN-RELATED
LLU|FUN_007773-T1MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10
LLU|FUN_007774-T1
LLU|FUN_007775-T1MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10
LLU|FUN_007776-T1
LLU|FUN_007777-T1RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
LLU|FUN_007778-T1
LLU|FUN_007779-T1COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING
LLU|FUN_007780-T1
LLU|FUN_007781-T1
LLU|FUN_007782-T1
LLU|FUN_007783-T1
LLU|FUN_007784-T1
LLU|FUN_007785-T1
LLU|FUN_007786-T1
LLU|FUN_007787-T1
LLU|FUN_007788-T1
LLU|FUN_007789-T1
LLU|FUN_007790-T1
LLU|FUN_007791-T1
LLU|FUN_007792-T1ZINC FINGER PROTEIN 142
LLU|FUN_007793-T1TRANSCRIPTIONAL REPRESSOR PROTEIN YY
LLU|FUN_007794-T1
LLU|FUN_007795-T1NEURALIZED
LLU|FUN_007796-T1UBIQUITIN-LIKE DOMAIN-CONTAINING PROTEIN
LLU|FUN_007797-T1SPRY DOMAIN CONTAINING SOCS BOX PROTEIN
LLU|FUN_007798-T1ALKALINE PHOSPHATASE
LLU|FUN_007799-T1ALKALINE PHOSPHATASE
LLU|FUN_007800-T1FIBRILLIN-RELATED
LLU|FUN_007801-T1
LLU|FUN_007802-T1TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL, SUBFAMILY M, MEMBER 6
LLU|FUN_007803-T1
LLU|FUN_007804-T1
LLU|FUN_007805-T1RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING
LLU|FUN_007806-T1
LLU|FUN_007807-T1MSF1/PX19 RELATED
LLU|FUN_007808-T1UNC-93 RELATED
LLU|FUN_007809-T1SI:CH211-266K2.1
LLU|FUN_007810-T1DUF853 DOMAIN-CONTAINING PROTEIN
LLU|FUN_007811-T1NADH DEHYDROGENASE [UBIQUINONE] 1 ALPHA SUBCOMPLEX ASSEMBLY FACTOR 8
LLU|FUN_007812-T1UBIQUITIN-CONJUGATING ENZYME E2
LLU|FUN_007813-T1
LLU|FUN_007814-T1ATP-BINDING TRANSPORT PROTEIN-RELATED
LLU|FUN_007815-T1ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD
LLU|FUN_007816-T1
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