About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_007667-T1
LLU|FUN_007668-T1IONOTROPIC GLUTAMATE RECEPTOR
LLU|FUN_007669-T1SODIUM/CHLORIDE DEPENDENT TRANSPORTER
LLU|FUN_007670-T1PROTEIN CBG24663
LLU|FUN_007671-T1WD40 REPEAT PF20
LLU|FUN_007672-T1
LLU|FUN_007673-T1
LLU|FUN_007674-T1TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED
LLU|FUN_007675-T1
LLU|FUN_007676-T1
LLU|FUN_007677-T1TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED
LLU|FUN_007678-T1TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED
LLU|FUN_007679-T1TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED
LLU|FUN_007680-T1
LLU|FUN_007681-T1
LLU|FUN_007682-T1-
LLU|FUN_007683-T1NOTCH LIGAND FAMILY MEMBER
LLU|FUN_007684-T1MICOS COMPLEX SUBUNIT MIC26 / MIC27 FAMILY MEMBER
LLU|FUN_007685-T1
LLU|FUN_007686-T1
LLU|FUN_007687-T1LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED
LLU|FUN_007688-T1
LLU|FUN_007689-T1LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED
LLU|FUN_007690-T1
LLU|FUN_007691-T1COILED-COIL DOMAIN-CONTAINING PROTEIN 32
LLU|FUN_007692-T1CYSTEINE PROTEASE FAMILY C1-RELATED
LLU|FUN_007693-T1CYSTEINE PROTEASE FAMILY C1-RELATED
LLU|FUN_007694-T1
LLU|FUN_007695-T1IRE1-RELATED
LLU|FUN_007696-T1RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
LLU|FUN_007697-T1EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED
LLU|FUN_007698-T1UPF0184 PROTEIN C9ORF16
LLU|FUN_007699-T1SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS
LLU|FUN_007700-T1SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS
LLU|FUN_007701-T1SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS
LLU|FUN_007702-T1
LLU|FUN_007703-T1AGAP001331-PA-RELATED
LLU|FUN_007704-T1
LLU|FUN_007705-T1OS10G0105400 PROTEIN
LLU|FUN_007706-T1
LLU|FUN_007707-T1
LLU|FUN_007708-T1IONOTROPIC GLUTAMATE RECEPTOR
LLU|FUN_007709-T1FI01416P
LLU|FUN_007710-T1FLAVIN MONOAMINE OXIDASE
LLU|FUN_007711-T1BIOGENESIS OF LYSOSOME-RELATED ORGANELLES COMPLEX 1 SUBUNIT 5
LLU|FUN_007712-T1REGULATING SYNAPTIC MEMBRANE EXOCYTOSIS PROTEIN
LLU|FUN_007713-T1REGULATING SYNAPTIC MEMBRANE EXOCYTOSIS PROTEIN
LLU|FUN_007714-T1REGULATING SYNAPTIC MEMBRANE EXOCYTOSIS PROTEIN
LLU|FUN_007715-T1
LLU|FUN_007716-T1DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAINING
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