About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_007367-T1NAZO FAMILY MEMBER
LLU|FUN_007368-T1ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASE
LLU|FUN_007369-T1
LLU|FUN_007370-T1
LLU|FUN_007371-T1COLLAGEN ALPHA
LLU|FUN_007372-T1
LLU|FUN_007373-T1
LLU|FUN_007374-T1POU DOMAIN
LLU|FUN_007375-T1
LLU|FUN_007376-T1
LLU|FUN_007377-T1ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN
LLU|FUN_007378-T1TRANSMEMBRANE PROTEIN 242
LLU|FUN_007379-T1REGULATOR OF CHROMOSOME CONDENSATION
LLU|FUN_007380-T1
LLU|FUN_007381-T1CHLORIDE INTRACELLULAR CHANNEL, ISOFORM A
LLU|FUN_007382-T1PROFILIN
LLU|FUN_007383-T1FAMILY WITH SEQUENCE SIMILARITY 228 MEMBER A
LLU|FUN_007384-T1PROPROTEIN CONVERTASE SUBTILISIN/KEXIN-RELATED
LLU|FUN_007385-T1CAAX PRENYL PROTEASE 1
LLU|FUN_007386-T1PROTEASOME ASSEMBLY CHAPERONE 1
LLU|FUN_007387-T1SYNAPSE-ASSOCIATED PROTEIN
LLU|FUN_007388-T1
LLU|FUN_007389-T1HEADCASE PROTEIN
LLU|FUN_007390-T1-
LLU|FUN_007391-T1RNA CLEAVAGE STIMULATION FACTOR
LLU|FUN_007392-T1RNA CLEAVAGE STIMULATION FACTOR
LLU|FUN_007393-T1TUBULIN
LLU|FUN_007394-T1EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT I
LLU|FUN_007395-T1NADH-UBIQUINONE OXIDOREDUCTASE ASHI SUBUNIT
LLU|FUN_007396-T1CYTOKINE RECEPTOR
LLU|FUN_007397-T1RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE O
LLU|FUN_007398-T1CYTOKINE RECEPTOR
LLU|FUN_007399-T1
LLU|FUN_007400-T1
LLU|FUN_007401-T1FI19613P1
LLU|FUN_007402-T1
LLU|FUN_007403-T1
LLU|FUN_007404-T1
LLU|FUN_007405-T1
LLU|FUN_007406-T1
LLU|FUN_007407-T1
LLU|FUN_007408-T1AGAP012002-PA
LLU|FUN_007409-T1
LLU|FUN_007410-T1
LLU|FUN_007411-T1XRP2 PROTEIN
LLU|FUN_007412-T1ACYL-COA SYNTHETASE
LLU|FUN_007413-T1
LLU|FUN_007414-T1
LLU|FUN_007415-T1EGF-LIKE DOMAIN-CONTAINING PROTEIN
LLU|FUN_007416-T1
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