About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_007116-T1FCH AND DOUBLE SH3 DOMAINS PROTEIN
LLU|FUN_007117-T1
LLU|FUN_007118-T1UNCHARACTERIZED
LLU|FUN_007119-T1
LLU|FUN_007120-T1
LLU|FUN_007121-T1
LLU|FUN_007122-T1CCHC-TYPE DOMAIN-CONTAINING PROTEIN
LLU|FUN_007123-T1VINCULIN
LLU|FUN_007124-T1
LLU|FUN_007125-T1VINCULIN
LLU|FUN_007126-T1G PATCH DOMAIN CONTAINING PROTEIN
LLU|FUN_007127-T1SERINE/THREONINE-PROTEIN KINASE PLK
LLU|FUN_007128-T1
LLU|FUN_007129-T1GPI MANNOSYLTRANSFERASE 2
LLU|FUN_007130-T1TNF RECEPTOR ASSOCIATED FACTOR
LLU|FUN_007131-T1ZINC FINGER CCCH DOMAIN-CONTAINING PROTEI
LLU|FUN_007132-T1SUPPRESSOR OF TY 5
LLU|FUN_007133-T1
LLU|FUN_007134-T1
LLU|FUN_007135-T1
LLU|FUN_007136-T1
LLU|FUN_007137-T1
LLU|FUN_007138-T1
LLU|FUN_007139-T1
LLU|FUN_007140-T1PAXILLIN-RELATED
LLU|FUN_007141-T1
LLU|FUN_007142-T1
LLU|FUN_007143-T1NEUROLIGIN
LLU|FUN_007144-T1NOTCH LIGAND FAMILY MEMBER
LLU|FUN_007145-T1NOTCH LIGAND FAMILY MEMBER
LLU|FUN_007146-T1
LLU|FUN_007147-T1
LLU|FUN_007148-T1
LLU|FUN_007149-T1
LLU|FUN_007150-T1
LLU|FUN_007151-T1
LLU|FUN_007152-T1
LLU|FUN_007153-T1TRANSCRIPTIONAL REGULATOR PROTEIN HCNGP
LLU|FUN_007154-T1GUANYLATE KINASE-RELATED
LLU|FUN_007155-T1SODIUM CHANNEL MODIFIER 1
LLU|FUN_007156-T1RTDR1
LLU|FUN_007157-T1
LLU|FUN_007159-T1
LLU|FUN_007160-T1
LLU|FUN_007161-T1
LLU|FUN_007162-T1
LLU|FUN_007163-T1RING FINGER PROTEIN 31-RELATED
LLU|FUN_007164-T1PHOSPHATE-BINDING PROTEIN PSTS
LLU|FUN_007165-T1TYROSINE-PROTEIN KINASE
LLU|FUN_007166-T1
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