About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_007011-T1THYROTROPH EMBRYONIC FACTOR RELATED
LLU|FUN_007012-T1
LLU|FUN_007013-T1
LLU|FUN_007014-T1RHO FAMILY GTPASE
LLU|FUN_007015-T1NECTIN-RELATED
LLU|FUN_007016-T1
LLU|FUN_007017-T1MITOCHONDRIAL INNER MEMBRANE PROTEASE
LLU|FUN_007018-T1NITROGEN PERMEASE REGULATOR 2/TUMOR SUPPRESSOR CANDIDATE 4
LLU|FUN_007019-T1MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR B
LLU|FUN_007020-T1SYNAPTIC ADHESION-LIKE MOLECULE SALM
LLU|FUN_007021-T1
LLU|FUN_007022-T1PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN
LLU|FUN_007023-T1
LLU|FUN_007024-T1
LLU|FUN_007025-T1BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE
LLU|FUN_007026-T1RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
LLU|FUN_007027-T1RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
LLU|FUN_007028-T1
LLU|FUN_007029-T1
LLU|FUN_007030-T1
LLU|FUN_007031-T1
LLU|FUN_007032-T1
LLU|FUN_007033-T1DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE 48 KDA SUBUNIT
LLU|FUN_007034-T1COILED-COIL DOMAIN-CONTAINING PROTEIN 150
LLU|FUN_007035-T1MICROSOMAL SIGNAL PEPTIDASE 12 KDA SUBUNIT
LLU|FUN_007040-T1
LLU|FUN_007041-T1DIMETHYLANILINE MONOOXYGENASE
LLU|FUN_007042-T1DIMETHYLANILINE MONOOXYGENASE
LLU|FUN_007043-T1KRAB AND ZINC FINGER DOMAIN-CONTAINING
LLU|FUN_007044-T1ZINC FINGER PROTEIN
LLU|FUN_007045-T1AB HYDROLASE SUPERFAMILY PROTEIN C4A8.06C
LLU|FUN_007046-T1DEOXYRIBONUCLEASE II
LLU|FUN_007047-T1AB HYDROLASE SUPERFAMILY PROTEIN C4A8.06C
LLU|FUN_007048-T1DEOXYRIBONUCLEASE II
LLU|FUN_007049-T1ARYLACETAMIDE DEACETYLASE
LLU|FUN_007051-T1
LLU|FUN_007052-T1MONOCARBOXYLATE TRANSPORTER
LLU|FUN_007053-T1COLLAGEN ALPHA
LLU|FUN_007054-T1
LLU|FUN_007055-T1
LLU|FUN_007056-T1
LLU|FUN_007057-T1
LLU|FUN_007058-T1
LLU|FUN_007059-T1
LLU|FUN_007060-T1POTASSIUM CHANNEL, SUBFAMILY K
LLU|FUN_007061-T1
LLU|FUN_007062-T1
LLU|FUN_007063-T1
LLU|FUN_007064-T1
LLU|FUN_007065-T1
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