About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_006861-T1RAB GDP/GTP EXCHANGE FACTOR
LLU|FUN_006862-T1KINESIN-LIKE PROTEIN KIN-12D
LLU|FUN_006863-T1
LLU|FUN_006864-T1
LLU|FUN_006865-T1
LLU|FUN_006866-T1ACYL CARRIER PROTEIN
LLU|FUN_006867-T1VACUOLAR IMPORT AND DEGRADATION PROTEIN 24
LLU|FUN_006868-T1ATP SYNTHASE MITOCHONDRIAL F1 COMPLEX ASSEMBLY FACTOR 2/ATP12 PROTEIN, MITOCHONDRIAL PRECURSOR
LLU|FUN_006869-T1PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT SDS22-RELATED
LLU|FUN_006870-T1VHS DOMAIN CONTAINING PROTEIN FAMILY
LLU|FUN_006871-T1SIGNAL RECOGNITION PARTICLE 68 KDA PROTEIN
LLU|FUN_006872-T1E3 UBIQUITIN-PROTEIN LIGASE CHIP
LLU|FUN_006873-T1DNA-DIRECTED RNA POLYMERASE II, III
LLU|FUN_006874-T1MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR B
LLU|FUN_006875-T1
LLU|FUN_006876-T1
LLU|FUN_006877-T1
LLU|FUN_006878-T1
LLU|FUN_006879-T1GLYCINE-RICH CELL WALL STRUCTURAL PROTEIN 1-LIKE
LLU|FUN_006880-T1
LLU|FUN_006881-T1
LLU|FUN_006882-T1
LLU|FUN_006883-T1
LLU|FUN_006884-T1
LLU|FUN_006885-T1THIOREDOXIN, MITOCHONDRIAL
LLU|FUN_006886-T1UNCHARACTERIZED
LLU|FUN_006887-T1ATAXIA TELANGIECTASIA MUTATED ATM -RELATED
LLU|FUN_006888-T15-HYDROXYTRYPTAMINE RECEPTOR
LLU|FUN_006889-T1
LLU|FUN_006890-T1ATAXIA TELANGIECTASIA MUTATED ATM -RELATED
LLU|FUN_006891-T1
LLU|FUN_006892-T1
LLU|FUN_006893-T1HISTAMINE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
LLU|FUN_006894-T1
LLU|FUN_006895-T1
LLU|FUN_006896-T1
LLU|FUN_006897-T1
LLU|FUN_006898-T1
LLU|FUN_006899-T1
LLU|FUN_006900-T1
LLU|FUN_006901-T1ACTIN
LLU|FUN_006902-T1PEROXISOMAL 2,4-DIENOYL-COA REDUCTASE
LLU|FUN_006903-T1
LLU|FUN_006904-T1TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED
LLU|FUN_006905-T1TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED
LLU|FUN_006906-T1
LLU|FUN_006907-T1TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED
LLU|FUN_006908-T1MAESTRO-RELATED HEAT DOMAIN-CONTAINING
LLU|FUN_006909-T1MAESTRO-RELATED HEAT DOMAIN-CONTAINING
LLU|FUN_006910-T1MUCIN-22
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