About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_006610-T1
LLU|FUN_006611-T1
LLU|FUN_006612-T1VOLTAGE-GATED POTASSIUM CHANNEL
LLU|FUN_006613-T1VOLTAGE-GATED POTASSIUM CHANNEL
LLU|FUN_006614-T1
LLU|FUN_006615-T1
LLU|FUN_006616-T1OS-9-RELATED
LLU|FUN_006617-T1
LLU|FUN_006618-T1
LLU|FUN_006619-T1DIACYLGLYCEROL KINASE
LLU|FUN_006620-T1
LLU|FUN_006621-T1
LLU|FUN_006622-T1CYTOCHROME P450 20A1
LLU|FUN_006623-T1
LLU|FUN_006624-T1CYTOCHROME P450 20A1
LLU|FUN_006626-T1
LLU|FUN_006627-T1CYTOCHROME P450 20A1
LLU|FUN_006628-T1
LLU|FUN_006629-T1
LLU|FUN_006630-T1
LLU|FUN_006631-T1
LLU|FUN_006632-T1
LLU|FUN_006633-T1
LLU|FUN_006634-T1PLECKSTRIN HOMOLOGY DOMAIN-CONTAINING FAMILY M MEMBER 2
LLU|FUN_006635-T1PROTEIN CBG16428
LLU|FUN_006636-T1
LLU|FUN_006637-T1
LLU|FUN_006638-T1
LLU|FUN_006639-T1
LLU|FUN_006640-T1
LLU|FUN_006641-T1MYO-INOSITOL-1 PHOSPHATE SYNTHASE
LLU|FUN_006642-T1NEUGRIN
LLU|FUN_006643-T1FMRFAMIDE RECEPTOR-RELATED
LLU|FUN_006644-T1MUCIN-22
LLU|FUN_006645-T1
LLU|FUN_006646-T1SOLUTE CARRIER FAMILY 22 MEMBER
LLU|FUN_006647-T1SOLUTE CARRIER FAMILY 22 MEMBER
LLU|FUN_006648-T1SOLUTE CARRIER FAMILY 22 MEMBER
LLU|FUN_006649-T1
LLU|FUN_006650-T1EGL NINE HOMOLOG-RELATED
LLU|FUN_006651-T1PROTEIN MEMO1
LLU|FUN_006652-T1ZINC FINGER CONTAINING PROTEIN
LLU|FUN_006653-T1CNH DOMAIN CONTAINING
LLU|FUN_006654-T1LUNG SEVEN TRANSMEMBRANE RECEPTOR
LLU|FUN_006655-T1TYROSINE-PROTEIN KINASE RECEPTOR
LLU|FUN_006656-T1BCS1 AAA-TYPE ATPASE
LLU|FUN_006657-T1UNCHARACTERIZED
LLU|FUN_006658-T1PURPLE ACID PHOSPHATASE
LLU|FUN_006659-T1
LLU|FUN_006660-T1
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