About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_006661-T1PURPLE ACID PHOSPHATASE
LLU|FUN_006662-T1PROTEIN PAXX
LLU|FUN_006663-T1DOLICHYL GLYCOSYLTRANSFERASE
LLU|FUN_006664-T1MAP/MICROTUBULE AFFINITY-REGULATING KINASE
LLU|FUN_006665-T1DNA REPAIR PROTEIN XRCC3
LLU|FUN_006666-T1
LLU|FUN_006667-T1TYROSINE-PROTEIN PHOSPHATASE
LLU|FUN_006668-T1CENTROSOMAL PROTEIN 2
LLU|FUN_006669-T1HISTONE H3.2
LLU|FUN_006670-T1PROTEIN CBG25533
LLU|FUN_006671-T1TRANSMEMBRANE PROTEIN 229 FAMILY MEMBER
LLU|FUN_006672-T1
LLU|FUN_006673-T1TSEC-2-RELATED
LLU|FUN_006674-T1
LLU|FUN_006675-T1
LLU|FUN_006676-T1FAM98
LLU|FUN_006677-T1
LLU|FUN_006678-T1FAM98
LLU|FUN_006679-T1FAM98
LLU|FUN_006680-T1NOTCH LIGAND FAMILY MEMBER
LLU|FUN_006681-T1VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
LLU|FUN_006682-T1
LLU|FUN_006683-T1VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
LLU|FUN_006684-T1
LLU|FUN_006685-T1
LLU|FUN_006686-T1
LLU|FUN_006687-T1VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
LLU|FUN_006688-T1
LLU|FUN_006689-T1MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED
LLU|FUN_006690-T1
LLU|FUN_006691-T1
LLU|FUN_006692-T1
LLU|FUN_006693-T1
LLU|FUN_006694-T1
LLU|FUN_006695-T1
LLU|FUN_006696-T1PEPTIDASE
LLU|FUN_006697-T1
LLU|FUN_006698-T1
LLU|FUN_006699-T1
LLU|FUN_006700-T1
LLU|FUN_006701-T1
LLU|FUN_006702-T1
LLU|FUN_006703-T1
LLU|FUN_006704-T1
LLU|FUN_006705-T1JNK/SAPK-ASSOCIATED PROTEIN
LLU|FUN_006706-T1JNK/SAPK-ASSOCIATED PROTEIN
LLU|FUN_006707-T1JNK/SAPK-ASSOCIATED PROTEIN
LLU|FUN_006708-T1ADENYLATE CYCLASE TYPE 1
LLU|FUN_006709-T1
LLU|FUN_006710-T1EXOSOME COMPLEX EXONUCLEASE RIBOSOMAL RNA PROCESSING PROTEIN
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