About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_006459-T1
LLU|FUN_006460-T1
LLU|FUN_006461-T1
LLU|FUN_006462-T1SET DOMAIN-CONTAINING PROTEIN-RELATED
LLU|FUN_006463-T1
LLU|FUN_006464-T1SPERIOLIN-BINDING FACTOR
LLU|FUN_006465-T1SPERIOLIN-BINDING FACTOR
LLU|FUN_006466-T1DYNEIN HEAVY CHAIN
LLU|FUN_006467-T1CDP-DIACYLGLYCEROL--SERINE O-PHOSPHATIDYLTRANSFERASE
LLU|FUN_006468-T1TETRASPANIN
LLU|FUN_006469-T1
LLU|FUN_006470-T1
LLU|FUN_006471-T1AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2
LLU|FUN_006472-T1AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2
LLU|FUN_006473-T1CENTROSOMAL PROTEIN OF 290 KDA
LLU|FUN_006474-T1ACYL-COA-BINDING DOMAIN-CONTAINING PROTEIN 5
LLU|FUN_006475-T1SELENOPROTEIN F
LLU|FUN_006476-T1
LLU|FUN_006477-T1
LLU|FUN_006478-T13'-5' EXONUCLEASE DOMAIN-CONTAINING PROTEIN
LLU|FUN_006479-T1DOLICHOL PHOSPHATE-MANNOSE BIOSYNTHESIS REGULATORY PROTEIN
LLU|FUN_006480-T1KINETOCHORE-ASSOCIATED PROTEIN DSN1 HOMOLOG
LLU|FUN_006481-T1ANK_REP_REGION DOMAIN-CONTAINING PROTEIN
LLU|FUN_006482-T1
LLU|FUN_006483-T1
LLU|FUN_006484-T1
LLU|FUN_006485-T1TRANSFORMING GROWTH FACTOR-BETA RECEPTOR TYPE I AND II
LLU|FUN_006486-T1
LLU|FUN_006487-T1TRANSFORMING GROWTH FACTOR-BETA RECEPTOR TYPE I AND II
LLU|FUN_006488-T1SOLUTE CARRIER FAMILY 39
LLU|FUN_006489-T15-HYDROXYTRYPTAMINE RECEPTOR
LLU|FUN_006490-T15-HYDROXYTRYPTAMINE RECEPTOR
LLU|FUN_006491-T1
LLU|FUN_006492-T1
LLU|FUN_006493-T1
LLU|FUN_006494-T1
LLU|FUN_006495-T1
LLU|FUN_006496-T1
LLU|FUN_006497-T1CS DOMAIN-CONTAINING PROTEIN
LLU|FUN_006498-T1
LLU|FUN_006499-T1N-ACETYLGALACTOSAMINYLTRANSFERASE
LLU|FUN_006500-T1CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 221
LLU|FUN_006501-T1ADP RIBOSYLATION FACTOR-RELATED
LLU|FUN_006502-T1DEPHOSPHO-COA KINASE-RELATED
LLU|FUN_006503-T1DELTEX-RELATED
LLU|FUN_006504-T1DELTEX-RELATED
LLU|FUN_006505-T1COILED-COIL DOMAIN-CONTAINING 74A
LLU|FUN_006506-T1SLINGSHOT PROTEIN PHOSPHATASE HOMOLOG
LLU|FUN_006507-T1EF-HAND CALCIUM-BINDING DOMAIN-CONTAINING PROTEIN 5
LLU|FUN_006508-T128S RIBOSOMAL PROTEIN S36, MITOCHONDRIAL
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