About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_006761-T1CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER
LLU|FUN_006762-T1
LLU|FUN_006763-T1ACROSIN-RELATED
LLU|FUN_006764-T1AMPLIFIED IN BREAST CANCER 2-RELATED
LLU|FUN_006765-T1
LLU|FUN_006766-T1N-ACETYLGLUCOSAMINYL-PHOSPHATIDYLINOSITOL BIOSYNTHETIC PROTEIN
LLU|FUN_006767-T1DNA REPAIR PROTEIN REV1
LLU|FUN_006768-T1UNCHARACTERIZED
LLU|FUN_006769-T1DYNAMIN
LLU|FUN_006770-T1PEROXISOMAL TARGETING SIGNAL 1 RECEPTOR PEX5
LLU|FUN_006771-T1RETINAL ROD RHODOPSIN-SENSITIVE CGMP 3',5'-CYCLIC PHOSPHODIESTERASE DELTA-SUBUNIT
LLU|FUN_006772-T1RIBOSOMAL PROTEIN L47, MITOCHONDRIAL-RELATED
LLU|FUN_006773-T1PROHIBITIN
LLU|FUN_006774-T1
LLU|FUN_006775-T1INNER MEMBRANE TRANSPORTER YGJI-RELATED
LLU|FUN_006776-T1
LLU|FUN_006777-T1INNEXIN
LLU|FUN_006778-T1INNEXIN
LLU|FUN_006779-T1INNEXIN
LLU|FUN_006780-T1INNEXIN
LLU|FUN_006781-T1
LLU|FUN_006782-T1INNEXIN
LLU|FUN_006783-T1TROPONIN C-AKIN-1 PROTEIN
LLU|FUN_006784-T1
LLU|FUN_006785-T1
LLU|FUN_006786-T1
LLU|FUN_006787-T1
LLU|FUN_006788-T1
LLU|FUN_006789-T1ATP-DEPENDENT RNA HELICASE DBP3
LLU|FUN_006790-T1
LLU|FUN_006791-T1
LLU|FUN_006792-T1
LLU|FUN_006793-T1
LLU|FUN_006794-T1FIBRINOGEN/TENASCIN/ANGIOPOEITIN
LLU|FUN_006795-T1TRANSIENT RECEPTOR POTENTIAL CHANNEL
LLU|FUN_006796-T1REPETIN
LLU|FUN_006797-T1TRANSIENT RECEPTOR POTENTIAL CHANNEL
LLU|FUN_006798-T1GALACTOSIDE 2-L-FUCOSYLTRANSFERASE
LLU|FUN_006799-T1G-PROTEIN COUPLED RECEPTOR
LLU|FUN_006800-T1
LLU|FUN_006801-T1PROTEIN EVA-1
LLU|FUN_006802-T1DEOXYNUCLEOSIDE TRIPHOSPHATE TRIPHOSPHOHYDROLASE
LLU|FUN_006803-T1
LLU|FUN_006804-T1DEOXYNUCLEOSIDE TRIPHOSPHATE TRIPHOSPHOHYDROLASE
LLU|FUN_006805-T1DEOXYNUCLEOSIDE TRIPHOSPHATE TRIPHOSPHOHYDROLASE
LLU|FUN_006806-T1DEOXYNUCLEOSIDE TRIPHOSPHATE TRIPHOSPHOHYDROLASE
LLU|FUN_006807-T1DEOXYNUCLEOSIDE TRIPHOSPHATE TRIPHOSPHOHYDROLASE
LLU|FUN_006808-T1
LLU|FUN_006809-T1DELTA-AMINOLEVULINIC ACID DEHYDRATASE
LLU|FUN_006810-T1SNARE-ASSOCIATED PROTEIN SNAPIN
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