About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_007417-T1
LLU|FUN_007418-T1
LLU|FUN_007419-T1THAP DOMAIN PROTEIN
LLU|FUN_007420-T1
LLU|FUN_007421-T1
LLU|FUN_007422-T1VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
LLU|FUN_007423-T1
LLU|FUN_007424-T1FACIOGENITAL DYSPLASIA PROTEIN
LLU|FUN_007425-T1SH3 ADAPTER PROTEIN SPIN90 NCK INTERACTING PROTEIN WITH SH3 DOMAIN
LLU|FUN_007426-T1SH3 ADAPTER PROTEIN SPIN90 NCK INTERACTING PROTEIN WITH SH3 DOMAIN
LLU|FUN_007427-T1
LLU|FUN_007428-T1
LLU|FUN_007429-T1
LLU|FUN_007430-T1WNT RELATED
LLU|FUN_007431-T1WNT RELATED
LLU|FUN_007432-T1
LLU|FUN_007433-T1WNT RELATED
LLU|FUN_007434-T1ANTIGEN BSP, PUTATIVE-RELATED
LLU|FUN_007435-T1
LLU|FUN_007436-T1
LLU|FUN_007437-T1
LLU|FUN_007438-T1RGD1565685 PROTEIN
LLU|FUN_007439-T1
LLU|FUN_007440-T1HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
LLU|FUN_007441-T1PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN AND LEUCINE-RICH REPEAT-CONTAINING PROTEIN 47
LLU|FUN_007442-T1FRUCTOSE-2,6-BISPHOSPHATASE TIGAR
LLU|FUN_007443-T1BIOTIN PROTEIN LIGASE
LLU|FUN_007444-T1TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 6
LLU|FUN_007445-T1SPLICING FACTOR (PAD-1), PUTATIVE (AFU_ORTHOLOGUE AFUA_1G15810)-RELATED
LLU|FUN_007446-T1
LLU|FUN_007447-T1
LLU|FUN_007448-T1
LLU|FUN_007449-T1
LLU|FUN_007450-T1
LLU|FUN_007451-T1
LLU|FUN_007452-T1
LLU|FUN_007453-T1
LLU|FUN_007454-T1HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
LLU|FUN_007455-T1ARYLSULFATASE
LLU|FUN_007456-T1
LLU|FUN_007457-T1ATP-DEPENDENT RNA HELICASE
LLU|FUN_007458-T1SURFEIT LOCUS PROTEIN
LLU|FUN_007459-T1ARYLSULFATASE
LLU|FUN_007460-T1INTEGRATOR COMPLEX SUBUNIT 5
LLU|FUN_007461-T1TYROSINE-PROTEIN KINASE
LLU|FUN_007462-T1-
LLU|FUN_007463-T1MITOGUARDIN
LLU|FUN_007464-T1TUBULIN POLYGLUTAMYLASE
LLU|FUN_007465-T1
LLU|FUN_007466-T1ARMADILLO-TYPE FOLD-RELATED
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