About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_007970-T1UNCHARACTERIZED
LLU|FUN_007971-T1LEUKOCYTE RECEPTOR CLUSTER MEMBER 9
LLU|FUN_007972-T1FI14130P
LLU|FUN_007973-T1-
LLU|FUN_007974-T1G-PROTEIN COUPLED RECEPTOR
LLU|FUN_007975-T1
LLU|FUN_007976-T1METHYLTRANSFERASE-LIKE PROTEIN 24
LLU|FUN_007977-T1SCY1-RELATED S/T PROTEIN KINASE-LIKE
LLU|FUN_007978-T1
LLU|FUN_007979-T1TRANSMEMBRANE CHANNEL-RELATED
LLU|FUN_007980-T1POLYCOMB-LIKE TRANSCRIPTION FACTOR
LLU|FUN_007981-T1
LLU|FUN_007982-T1
LLU|FUN_007983-T1
LLU|FUN_007984-T1
LLU|FUN_007985-T1
LLU|FUN_007986-T1
LLU|FUN_007987-T1
LLU|FUN_007988-T1
LLU|FUN_007989-T1
LLU|FUN_007990-T1
LLU|FUN_007991-T1
LLU|FUN_007992-T1
LLU|FUN_007993-T1
LLU|FUN_007994-T1
LLU|FUN_007995-T1UBIQUITIN CARBOXYL-TERMINAL HYDROLASE
LLU|FUN_007996-T1
LLU|FUN_007997-T1UNCHARACTERIZED
LLU|FUN_007998-T1OXIDOREDUCTASE-LIKE DOMAIN-CONTAINING PROTEIN 1
LLU|FUN_007999-T1SIMILAR TO PREFERENTIALLY EXPRESSED ANTIGEN IN MELANOMA-LIKE 3
LLU|FUN_008000-T1NUCLEOTIDE-BINDING PROTEIN NBP35 YEAST -RELATED
LLU|FUN_008001-T1TEKTIN
LLU|FUN_008002-T1
LLU|FUN_008003-T1
LLU|FUN_008004-T1DIHYDRODIPICOLINATE SYNTHASE
LLU|FUN_008005-T160S RIBOSOMAL PROTEIN L34
LLU|FUN_008006-T1VESICLE TRANSPORT V-SNARE PROTEIN VTI1-RELATED
LLU|FUN_008007-T1
LLU|FUN_008008-T1
LLU|FUN_008009-T1
LLU|FUN_008010-T1
LLU|FUN_008011-T1TRANSCRIPTION FACTOR 7 FAMILY MEMBER
LLU|FUN_008012-T1
LLU|FUN_008013-T1WD40 REPEAT DOMAIN 95
LLU|FUN_008014-T1
LLU|FUN_008015-T1WD40 REPEAT DOMAIN 95
LLU|FUN_008016-T1
LLU|FUN_008017-T1
LLU|FUN_008018-T1SERINE HYDROXYMETHYLTRANSFERASE
LLU|FUN_008019-T1PROTEIN FAM227B
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