About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_008224-T1POLYCYSTIN FAMILY MEMBER
LLU|FUN_008225-T1POLYCYSTIN-1
LLU|FUN_008226-T1TGF-BETA FAMILY
LLU|FUN_008227-T1
LLU|FUN_008228-T1
LLU|FUN_008229-T1
LLU|FUN_008230-T1CHCHD1
LLU|FUN_008231-T1ESOPHAGEAL CANCER ASSOCIATED PROTEIN
LLU|FUN_008232-T1MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION, SUBUNIT 9
LLU|FUN_008233-T1GEM-ASSOCIATED PROTEIN 6
LLU|FUN_008234-T1PLECKSTRIN HOMOLOGY PH DOMAIN-CONTAINING PROTEIN
LLU|FUN_008235-T1CADHERIN-87A
LLU|FUN_008236-T1CADHERIN-23
LLU|FUN_008237-T1HEDGEHOG
LLU|FUN_008238-T1ENOYL-COA HYDRATASE-RELATED
LLU|FUN_008239-T1WD-REPEAT PROTEIN INTERACTING WITH PHOSPHOINOSIDES WIPI -RELATED
LLU|FUN_008240-T1ARMADILLO-LIKE HELICAL DOMAIN-CONTAINING PROTEIN 2
LLU|FUN_008241-T1
LLU|FUN_008242-T1
LLU|FUN_008243-T1
LLU|FUN_008244-T1-
LLU|FUN_008245-T1
LLU|FUN_008246-T1
LLU|FUN_008247-T1
LLU|FUN_008248-T1
LLU|FUN_008249-T1-
LLU|FUN_008250-T1
LLU|FUN_008251-T1-
LLU|FUN_008252-T1-
LLU|FUN_008253-T1POLYAMINE-MODULATED FACTOR 1-BINDING PROTEIN 1-RELATED
LLU|FUN_008254-T1
LLU|FUN_008255-T1UPF0711 PROTEIN C18ORF21
LLU|FUN_008256-T1IMPORTIN-7, 8, 11
LLU|FUN_008257-T1
LLU|FUN_008258-T1AB HYDROLASE SUPERFAMILY PROTEIN C4A8.06C
LLU|FUN_008259-T1THYLAKOID LUMENAL 17.4 KDA PROTEIN, CHLOROPLASTIC
LLU|FUN_008260-T1
LLU|FUN_008261-T1-
LLU|FUN_008262-T1
LLU|FUN_008263-T1
LLU|FUN_008264-T1
LLU|FUN_008265-T1
LLU|FUN_008266-T1
LLU|FUN_008267-T1
LLU|FUN_008268-T1CALPAIN, SMALL SUBUNIT 1 A-RELATED
LLU|FUN_008269-T1TYROSYL-DNA PHOSPHODIESTERASE 1
LLU|FUN_008270-T1B9 DOMAIN-CONTAINING
LLU|FUN_008271-T1
LLU|FUN_008272-T1UNCHARACTERIZED
LLU|FUN_008273-T1YNEIN REGULATORY COMPLEX SUBUNIT 5
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