About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_008429-T1
LLU|FUN_008430-T1ATILLA, ISOFORM B-RELATED-RELATED
LLU|FUN_008431-T1CARBONIC ANHYDRASE
LLU|FUN_008432-T1E3 UBIQUITIN-PROTEIN LIGASE RNF180
LLU|FUN_008433-T1PROLINE-SERINE-THREONINE PHOSPHATASE INTERACTING PROTEIN 1
LLU|FUN_008434-T1UDP-N-ACETYLGLUCOSAMINE--PEPTIDE N-ACETYLGLUCOSAMINYLTRANSFERASE 110 KDA SUBUNIT
LLU|FUN_008435-T1TETRA THYMOSIN
LLU|FUN_008436-T1WD40 REPEAT PROTEINPRL1/PRL2-RELATED
LLU|FUN_008437-T1CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED
LLU|FUN_008438-T1UPF0547 PROTEIN C16ORF87
LLU|FUN_008439-T1HSC70CB, ISOFORM G-RELATED
LLU|FUN_008440-T1HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
LLU|FUN_008441-T1HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
LLU|FUN_008442-T1
LLU|FUN_008443-T1PROTEASE FAMILY S9B,C DIPEPTIDYL-PEPTIDASE IV-RELATED
LLU|FUN_008444-T1COLLAGEN ALPHA
LLU|FUN_008445-T1
LLU|FUN_008446-T1COLLAGEN ALPHA
LLU|FUN_008447-T1
LLU|FUN_008448-T1
LLU|FUN_008449-T1
LLU|FUN_008450-T1
LLU|FUN_008451-T1
LLU|FUN_008452-T1
LLU|FUN_008453-T1
LLU|FUN_008454-T1
LLU|FUN_008455-T1UNCHARACTERIZED
LLU|FUN_008456-T1
LLU|FUN_008457-T1POTE ANKYRIN DOMAIN
LLU|FUN_008458-T1
LLU|FUN_008459-T1
LLU|FUN_008460-T1VOLTAGE-DEPENDENT CALCIUM CHANNEL SUBUNIT ALPHA-2/DELTA-RELATED
LLU|FUN_008461-T1
LLU|FUN_008462-T1
LLU|FUN_008463-T1
LLU|FUN_008464-T15-HYDROXYTRYPTAMINE RECEPTOR
LLU|FUN_008465-T1
LLU|FUN_008466-T1
LLU|FUN_008467-T1
LLU|FUN_008468-T1MUCIN 4-RELATED
LLU|FUN_008469-T1
LLU|FUN_008470-T1
LLU|FUN_008471-T1ZINC FINGER PROTEIN
LLU|FUN_008472-T1
LLU|FUN_008473-T12-5 OLIGOADENYLATE SYNTHETASE
LLU|FUN_008474-T1
LLU|FUN_008475-T1G-PROTEIN COUPLED RECEPTOR
LLU|FUN_008476-T1FMRFAMIDE RECEPTOR-RELATED
LLU|FUN_008477-T1
LLU|FUN_008478-T1
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