About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_008529-T15-HYDROXYTRYPTAMINE RECEPTOR
LLU|FUN_008530-T1
LLU|FUN_008531-T1
LLU|FUN_008532-T1
LLU|FUN_008533-T1SENTRIN-SPECIFIC PROTEASE 8
LLU|FUN_008534-T1E3 UBIQUITIN-PROTEIN LIGASE MARCH 2/3 FAMILY MEMBER
LLU|FUN_008535-T1
LLU|FUN_008536-T1
LLU|FUN_008537-T1
LLU|FUN_008538-T1
LLU|FUN_008539-T1FIBRINOGEN/TENASCIN/ANGIOPOEITIN
LLU|FUN_008540-T1
LLU|FUN_008541-T1
LLU|FUN_008542-T1
LLU|FUN_008543-T1RIBOSOMAL PROTEIN S6 KINASE
LLU|FUN_008544-T1
LLU|FUN_008545-T1FORKHEAD BOX PROTEIN
LLU|FUN_008546-T1U4/U6-ASSOCIATED RNA SPLICING FACTOR-RELATED
LLU|FUN_008547-T1HEPARAN SULFATE 2-O-SULFOTRANSFERASE
LLU|FUN_008548-T1
LLU|FUN_008549-T1
LLU|FUN_008550-T1
LLU|FUN_008551-T1HEPARAN SULFATE 2-O-SULFOTRANSFERASE
LLU|FUN_008552-T1SERINE/THREONINE-PROTEIN KINASE
LLU|FUN_008553-T1
LLU|FUN_008554-T1SERINE/THREONINE-PROTEIN KINASE
LLU|FUN_008555-T1
LLU|FUN_008556-T17,8-DIHYDRO-8-OXOGUANINE TRIPHOSPHATASE
LLU|FUN_008557-T1
LLU|FUN_008558-T1
LLU|FUN_008559-T1
LLU|FUN_008560-T1
LLU|FUN_008561-T1
LLU|FUN_008562-T1
LLU|FUN_008563-T1
LLU|FUN_008564-T1
LLU|FUN_008565-T1
LLU|FUN_008566-T1
LLU|FUN_008567-T1TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN
LLU|FUN_008568-T1GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE G6PD
LLU|FUN_008569-T1OS05G0300700 PROTEIN
LLU|FUN_008570-T1
LLU|FUN_008571-T1ATAXIA TELANGIECTASIA MUTATED ATM -RELATED
LLU|FUN_008572-T1
LLU|FUN_008573-T1MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM22
LLU|FUN_008574-T1
LLU|FUN_008575-T1NEPHRIN
LLU|FUN_008576-T1
LLU|FUN_008577-T1SI:CH211-59O9.10
LLU|FUN_008578-T1SI:CH211-59O9.10
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