About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_24996-4.18POTASSIUM CHANNEL, SUBFAMILY K
Bpl_scaf_24996-4.9CENTROSOMAL PROTEIN OF 170 KDA
Bpl_scaf_24996-5.13ENDOPLASMIC RETICULUM MEMBRANE-ASSOCIATED RNA DEGRADATION PROTEIN
Bpl_scaf_24996-5.14MONOCARBOXYLATE TRANSPORTER
Bpl_scaf_24996-5.19MONOCARBOXYLATE TRANSPORTER
Bpl_scaf_24996-5.20MONOCARBOXYLATE TRANSPORTER
Bpl_scaf_24996-5.9COLLAGEN ALPHA
Bpl_scaf_24996-6.1COLLAGEN ALPHA
Bpl_scaf_24996-6.10
Bpl_scaf_24996-6.4
Bpl_scaf_24996-6.7MONOCARBOXYLATE TRANSPORTER
Bpl_scaf_24996-7.0
Bpl_scaf_24996-7.1
Bpl_scaf_24996-7.11RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING
Bpl_scaf_24996-8.4SI:CH73-314G15.3
Bpl_scaf_24996-9.14UNCHARACTERIZED
Bpl_scaf_24996-9.15MALONATE-SEMIALDEHYDE DEHYDROGENASE
Bpl_scaf_24996-9.7LIN52 FAMILY MEMBER
Bpl_scaf_24997-0.0
Bpl_scaf_24997-0.1
Bpl_scaf_24998-0.1CYSTEINE PROTEASE FAMILY C1-RELATED
Bpl_scaf_25005-0.0
Bpl_scaf_25006-0.13CEREBELLIN-RELATED
Bpl_scaf_25006-0.9ZINC PHOSPHODIESTERASE ELAC PROTEIN 1
Bpl_scaf_25006-1.0
Bpl_scaf_25006-2.1
Bpl_scaf_25006-2.8DYNEIN LIGHT CHAIN
Bpl_scaf_25013-0.2MAJOR FACILITATOR SUPERFAMILY PROTEIN-RELATED
Bpl_scaf_25014-0.0
Bpl_scaf_25020-0.11INOSITOL POLYPHOSPHATE KINASE
Bpl_scaf_25020-0.6HIGH-AFFINITY CHOLINE TRANSPORTER 1
Bpl_scaf_25023-0.2P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE
Bpl_scaf_25025-0.2
Bpl_scaf_25028-0.10N-ACETYLGLUCOSAMINE-6-SULFATASE FAMILY MEMBER
Bpl_scaf_25028-0.6
Bpl_scaf_25028-0.8RUBY-EYE2-LIKE PROTEIN
Bpl_scaf_25028-1.0
Bpl_scaf_25028-1.13
Bpl_scaf_25028-1.15BEN DOMAIN-CONTAINING PROTEIN 3
Bpl_scaf_25028-1.17RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Bpl_scaf_25028-1.24
Bpl_scaf_25028-1.5BEN DOMAIN-CONTAINING PROTEIN 3
Bpl_scaf_25028-2.0
Bpl_scaf_25028-2.18
Bpl_scaf_25028-2.2
Bpl_scaf_25028-2.8
Bpl_scaf_25029-0.0
Bpl_scaf_25032-0.2
Bpl_scaf_25035-0.1
Bpl_scaf_25036-0.0GALACTOSIDE 2-L-FUCOSYLTRANSFERASE
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