About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_25036-1.1OS10G0105400 PROTEIN
Bpl_scaf_25036-2.17
Bpl_scaf_25036-2.18OS10G0105400 PROTEIN
Bpl_scaf_25036-2.19OS10G0105400 PROTEIN
Bpl_scaf_25036-2.20OS10G0105400 PROTEIN
Bpl_scaf_25036-2.6OS10G0105400 PROTEIN
Bpl_scaf_25038-0.1VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13
Bpl_scaf_25044-0.3VASCULAR CELL ADHESION MOLECULE 1
Bpl_scaf_25048-0.15
Bpl_scaf_25048-0.19UNCHARACTERIZED
Bpl_scaf_25048-1.1
Bpl_scaf_25048-1.11
Bpl_scaf_25048-1.2
Bpl_scaf_25048-1.5PEPTIDASE
Bpl_scaf_25048-2.11DEATH DOMAIN-CONTAINING PROTEIN CRADD
Bpl_scaf_25048-2.13
Bpl_scaf_25048-2.17
Bpl_scaf_25048-2.20CYTOCHROME P450 508A4-RELATED
Bpl_scaf_25048-2.8
Bpl_scaf_25139-0.1
Bpl_scaf_25139-0.11DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE
Bpl_scaf_25139-0.5ADP-RIBOSYLATION FACTOR-RELATED PROTEIN 1
Bpl_scaf_25139-0.7N-ACETYLTRANSFERASE ECO
Bpl_scaf_25140-0.1
Bpl_scaf_25140-0.16RNA RECOGNITION MOTIF-CONTAINING
Bpl_scaf_25140-0.17HEAT SHOCK PROTEIN 70KDA
Bpl_scaf_25140-0.2
Bpl_scaf_25140-0.3
Bpl_scaf_25141-0.2GLE-1-RELATED
Bpl_scaf_25143-0.0
Bpl_scaf_25149-0.0
Bpl_scaf_25151-0.2PHOSPHOGLYCOLATE PHOSPHATASE
Bpl_scaf_2516-0.5USP DOMAIN-CONTAINING PROTEIN
Bpl_scaf_25165-0.0SYNTAXIN
Bpl_scaf_25165-1.10
Bpl_scaf_25165-1.2DNAJ HOMOLOG SUBFAMILY C MEMBER 30, MITOCHONDRIAL
Bpl_scaf_25165-1.5VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 37
Bpl_scaf_25165-1.7METHYLTRANSFERASE-RELATED
Bpl_scaf_25165-1.8RAN GTPASE
Bpl_scaf_25165-2.0SUCCINATE/FUMARATE MITOCHONDRIAL TRANSPORTER-RELATED
Bpl_scaf_25165-2.18TEKTIN
Bpl_scaf_25165-2.6NYD-SP28 PROTEIN
Bpl_scaf_25165-3.8
Bpl_scaf_25167-0.0
Bpl_scaf_25169-0.0
Bpl_scaf_2517-0.10THIOPURINE S-METHYLTRANSFERASE
Bpl_scaf_2517-0.15DNA HELICASE RECQ FAMILY MEMBER
Bpl_scaf_2517-0.17INHIBITOR OF GROWTH PROTEIN
Bpl_scaf_2517-0.43CRUMBS FAMILY MEMBER
Bpl_scaf_2517-0.45UNCHARACTERIZED
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