About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_24479-4.15ALPHA KINASE/ELONGATION FACTOR 2 KINASE
Bpl_scaf_24479-4.22
Bpl_scaf_24479-4.5NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
Bpl_scaf_24480-0.0
Bpl_scaf_24490-0.0CARTILAGE ACIDIC PROTEIN 1
Bpl_scaf_24499-0.1
Bpl_scaf_24508-0.3SULFOTRANSFERASE SULT
Bpl_scaf_24508-0.5LATROPHILIN RECEPTOR-LIKE PROTEIN A
Bpl_scaf_24533-0.0
Bpl_scaf_24541-0.7TRAF AND TNF RECEPTOR-ASSOCIATED PROTEIN
Bpl_scaf_24542-0.3UBIQUITIN CARBOXYL-TERMINAL HYDROLASE
Bpl_scaf_24542-1.4
Bpl_scaf_24542-1.6RNA RECOGNITION MOTIF RRM DOMAIN CONTAINING PROTEIN
Bpl_scaf_24542-4.18OS10G0105400 PROTEIN
Bpl_scaf_24542-4.19OS10G0105400 PROTEIN
Bpl_scaf_24553-0.0
Bpl_scaf_24591-0.9
Bpl_scaf_24592-0.47MYOSIN LIGHT CHAIN 1, 3
Bpl_scaf_24592-0.48MYOSIN LIGHT CHAIN 1, 3
Bpl_scaf_24592-0.7CALCIUM BINDING PROTEIN
Bpl_scaf_24592-1.11UNCHARACTERIZED
Bpl_scaf_24592-1.12SUN-COR STEROID HORMONE RECEPTOR CO-REPRESSOR
Bpl_scaf_24592-3.5DIACYLGLYCEROL KINASE
Bpl_scaf_24592-4.10ATP-DEPENDENT RNA HELICASE DBP3
Bpl_scaf_24592-4.11
Bpl_scaf_24592-4.21SODIUM/POTASSIUM-DEPENDENT ATPASE BETA SUBUNIT
Bpl_scaf_24603-0.15PLASMINOGEN-RELATED
Bpl_scaf_24608-0.0COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING
Bpl_scaf_24616-0.5
Bpl_scaf_24626-0.0
Bpl_scaf_24655-0.4TUMOR ENDOTHELIAL MARKER 7 RELATED
Bpl_scaf_24656-2.3CARDIOACCELERATORY PEPTIDE RECEPTOR-RELATED
Bpl_scaf_24656-5.16
Bpl_scaf_24656-5.18GTPASE, IMAP FAMILY MEMBER-RELATED
Bpl_scaf_24656-5.5
Bpl_scaf_24656-5.7
Bpl_scaf_24657-0.11
Bpl_scaf_24657-0.12
Bpl_scaf_24657-0.8
Bpl_scaf_24672-0.0
Bpl_scaf_24672-0.3CELL DIVISION PROTEIN KINASE
Bpl_scaf_24672-0.4CELL DIVISION PROTEIN KINASE
Bpl_scaf_24672-0.5
Bpl_scaf_24681-0.0
Bpl_scaf_24692-0.1
Bpl_scaf_24692-0.10CCHC-TYPE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_24692-0.11
Bpl_scaf_24692-0.12
Bpl_scaf_24692-0.13
Bpl_scaf_24692-1.11PALMITOYLTRANSFERASE ZDHHC16
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