About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_24792-0.22
Bpl_scaf_24792-0.23
Bpl_scaf_24792-0.83-HYDROXYISOBUTYRATE DEHYDROGENASE-RELATED
Bpl_scaf_24792-0.9THREONINE DEHYDRATASE, MITOCHONDRIAL-RELATED
Bpl_scaf_24800-0.1
Bpl_scaf_24800-0.11RIBONUCLEIC ACID BINDING PROTEIN S1
Bpl_scaf_24800-0.12UBIQUITIN-CONJUGATING ENZYME E2
Bpl_scaf_24800-0.13HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGEN
Bpl_scaf_24800-0.8
Bpl_scaf_24814-0.0
Bpl_scaf_24814-0.16
Bpl_scaf_24814-0.18
Bpl_scaf_24814-0.19NECTIN-RELATED
Bpl_scaf_24823-0.17GLYCOPROTEIN HORMONE RECEPTOR
Bpl_scaf_24823-0.21
Bpl_scaf_24823-0.22OTU DOMAIN CONTAINING PROTEIN
Bpl_scaf_24823-0.23
Bpl_scaf_24825-0.0POTASSIUM CHANNEL TETRAMERIZATION DOMAIN-CONTAINING
Bpl_scaf_24833-0.0
Bpl_scaf_24833-0.1
Bpl_scaf_24833-0.8
Bpl_scaf_24834-0.3TRANSMEMBRANE PROTEIN 242
Bpl_scaf_24834-0.4ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN
Bpl_scaf_24834-0.5
Bpl_scaf_24834-1.11
Bpl_scaf_24834-1.12
Bpl_scaf_24834-1.8RECQ-MEDIATED GENOME INSTABILITY PROTEIN 1 RMI1
Bpl_scaf_24834-1.9RECQ-MEDIATED GENOME INSTABILITY PROTEIN 1 RMI1
Bpl_scaf_24834-2.3TUBBY-RELATED
Bpl_scaf_24834-3.0METABOTROPIC GLUTAMATE RECEPTOR
Bpl_scaf_24834-3.1METABOTROPIC GLUTAMATE RECEPTOR
Bpl_scaf_24834-3.5METABOTROPIC GLUTAMATE RECEPTOR
Bpl_scaf_24834-4.12
Bpl_scaf_24834-4.14
Bpl_scaf_24834-4.15OS10G0105400 PROTEIN
Bpl_scaf_24834-6.25UBX DOMAIN CONTAINING PROTEIN
Bpl_scaf_24834-6.26UBX DOMAIN CONTAINING PROTEIN
Bpl_scaf_24834-6.6SODIUM/CHLORIDE DEPENDENT TRANSPORTER
Bpl_scaf_24852-0.13
Bpl_scaf_24852-0.14UNCHARACTERIZED
Bpl_scaf_24852-0.15DYNACTIN 1-RELATED MICROTUBULE-BINDING
Bpl_scaf_24861-0.10MANNOSYL-OLIGOSACCHARIDE ALPHA-1,2-MANNOSIDASE-RELATED
Bpl_scaf_24861-0.11METAXIN RELATED
Bpl_scaf_24861-0.24
Bpl_scaf_24861-0.25UNCHARACTERIZED
Bpl_scaf_24861-0.26
Bpl_scaf_24874-0.10SIMILAR TO RIKEN CDNA E130308A19
Bpl_scaf_24874-0.3
Bpl_scaf_24880-0.15DOPAMINE BETA HYDROXYLASE RELATED
Bpl_scaf_24880-0.16MYD88
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