Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8003884.1 | |
| CAI8003891.1 | |
| CAI8003897.1 | |
| CAI8003895.1 | |
| CAI8003893.1 | |
| CAI8003901.1 | |
| CAI8003899.1 | |
| CAI8003903.1 | |
| CAI8003907.1 | |
| CAI8003905.1 | |
| CAI8003913.1 | ARMADILLO SEGMENT POLARITY PROTEIN |
| CAI8003909.1 | ARMADILLO SEGMENT POLARITY PROTEIN |
| CAI8003911.1 | ARMADILLO SEGMENT POLARITY PROTEIN |
| CAI8003915.1 | |
| CAI8003919.1 | ARMADILLO SEGMENT POLARITY PROTEIN |
| CAI8003917.1 | ARMADILLO SEGMENT POLARITY PROTEIN |
| CAI8003921.1 | ARMADILLO SEGMENT POLARITY PROTEIN |
| CAI8003923.1 | ARMADILLO SEGMENT POLARITY PROTEIN |
| CAI8003925.1 | ARMADILLO SEGMENT POLARITY PROTEIN |
| CAI8003927.1 | ARMADILLO SEGMENT POLARITY PROTEIN |
| CAI8003929.1 | |
| CAI8003932.1 | |
| CAI8003936.1 | |
| CAI8003934.1 | |
| CAI8003938.1 | |
| CAI8003942.1 | RIBOSOMAL PROTEIN S6 KINASE |
| CAI8003946.1 | |
| CAI8003944.1 | FRATAXIN |
| CAI8003948.1 | RIBOSOMAL PROTEIN S6 KINASE |
| CAI8003952.1 | OTU DOMAIN CONTAINING PROTEIN |
| CAI8003954.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8003958.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8003962.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8003956.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8003960.1 | |
| CAI8003964.1 | U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP4 |
| CAI8003970.1 | U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP4 |
| CAI8003968.1 | U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP4 |
| CAI8003966.1 | U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP4 |
| CAI8003972.1 | |
| CAI8003974.1 | |
| CAI8003978.1 | |
| CAI8003976.1 | |
| CAI8004006.1 | DOLICHOL PHOSPHATE-MANNOSE BIOSYNTHESIS REGULATORY PROTEIN |
| CAI8004008.1 | DOLICHOL PHOSPHATE-MANNOSE BIOSYNTHESIS REGULATORY PROTEIN |
| CAI8004010.1 | MUCOSA ASSOCIATED LYMPHOID TISSUE LYMPHOMA TRANSLOCATION PROTEIN 1/PARACASPASE |
| CAI8004012.1 | GLUCONOKINASE-RELATED |
| CAI8004014.1 | |
| CAI8004016.1 | |
| CAI8004018.1 | RIBOSOMAL PROTEIN S19P FAMILY MEMBER |
