About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides02783-
Paelopatides02784SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED
Paelopatides02785REQUIRED FOR MEIOTIC NUCLEAR DIVISION PROTEIN 1 HOMOLOG
Paelopatides02786TEKTIN
Paelopatides02787SUCCINATE/FUMARATE MITOCHONDRIAL TRANSPORTER-RELATED
Paelopatides02788COILED-COIL DOMAIN-CONTAINING PROTEIN 189
Paelopatides027895-HYDROXYTRYPTAMINE RECEPTOR
Paelopatides02790TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides02791-
Paelopatides02793ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides02794-
Paelopatides02795-
Paelopatides02796SLR5058 PROTEIN
Paelopatides02797ANTIGEN BSP, PUTATIVE-RELATED
Paelopatides02798ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides02799-
Paelopatides02800ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides02801RGPR-RELATED
Paelopatides02802-
Paelopatides02803PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
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