About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides02678BONUS, ISOFORM C-RELATED
Paelopatides02679ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides02680BONUS, ISOFORM C-RELATED
Paelopatides02681BUCENTAUR RELATED
Paelopatides02682PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides02683-
Paelopatides02684ALKALINE PHOSPHATASE
Paelopatides02685-
Paelopatides02686-
Paelopatides02687SEQUESTOSOME 1-RELATED
Paelopatides02688-
Paelopatides02689DNA HELICASE RECQ FAMILY MEMBER
Paelopatides02690-
Paelopatides02691ACYL-COA DEHYDROGENASE
Paelopatides02692IG-LIKE DOMAIN-CONTAINING PROTEIN
Paelopatides02693ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides02694TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides026952-OXOGLUTARATE DEHYDROGENASE
Paelopatides02696-
Paelopatides02697DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC2
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