About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides02557BEN DOMAIN-CONTAINING PROTEIN 6
Paelopatides02558BONUS, ISOFORM C-RELATED
Paelopatides02559RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
Paelopatides02560-
Paelopatides02561-
Paelopatides02562-
Paelopatides02563ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides02564EPM2A-INTERACTING PROTEIN 1
Paelopatides02565PULMONARY SURFACTANT-ASSOCIATED PROTEIN A
Paelopatides02566SYNAPTONEMAL COMPLEX PROTEIN 1
Paelopatides02567NEL HOMOLOG
Paelopatides02568NEL HOMOLOG
Paelopatides02569-
Paelopatides02570-
Paelopatides02571CARBOXYPEPTIDASE REGULATORY REGION-CONTAINING
Paelopatides02572PROTEIN CBG26694
Paelopatides02573-
Paelopatides02574PROTEIN CBG26694
Paelopatides02575ENZYMATIC POLYPROTEIN-RELATED
Paelopatides02576ENDONUCLEASE-RELATED
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