About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides02488REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides02489-
Paelopatides02490MOLYBDOPTERIN SYNTHASE SULFUR CARRIER SUBUNIT
Paelopatides02491MOLYBDOPTERIN SYNTHASE RELATED
Paelopatides02492PEPTIDYL-GLYCINE ALPHA-AMIDATING MONOOXYGENASE
Paelopatides02493CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE
Paelopatides02494L-GULONOLACTONE OXIDASE
Paelopatides02495-
Paelopatides02496REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides02497ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides02498ENDONUCLEASE-RELATED
Paelopatides02499ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides02500PARANEOPLASTIC ANTIGEN
Paelopatides02501POL PROTEIN
Paelopatides02502ENZYMATIC POLYPROTEIN-RELATED
Paelopatides02503-
Paelopatides02504-
Paelopatides02505-
Paelopatides02507REVERSE TRANSCRIPTASES
Paelopatides02508-
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