About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides02427FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides02428FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides0242952 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
Paelopatides02430-
Paelopatides02431-
Paelopatides02432MEMBRANE-BOUND LYTIC MUREIN TRANSGLYCOSYLASE F
Paelopatides02433-
Paelopatides02434PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides02435SPERM-ASSOCIATED ANTIGEN 8
Paelopatides02436LD11652P
Paelopatides02437NHL REPEAT-CONTAINING PROTEIN-RELATED
Paelopatides02438-
Paelopatides02439PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides02440ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides02441ENDONUCLEASE-RELATED
Paelopatides02442-
Paelopatides02443-
Paelopatides02445TRANSPOSON
Paelopatides02446REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides02447SRCR DOMAIN-CONTAINING PROTEIN
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