About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides02448-
Paelopatides02449PROTEIN CBG26694
Paelopatides02450PROTEIN CBG26694
Paelopatides02451PROTEIN CBG26694
Paelopatides02452PROTEIN CBG26694
Paelopatides02453-
Paelopatides02454HELICASE WITH DEATH DOMAIN-RELATED
Paelopatides02455NACHT DOMAIN-CONTAINING PROTEIN
Paelopatides02456MICRO-RNA BINDING ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 7
Paelopatides02457-
Paelopatides02458PROTEIN CBG26694
Paelopatides02459-
Paelopatides02460ENDONUCLEASE
Paelopatides02461-
Paelopatides02462-
Paelopatides02463-
Paelopatides02464-
Paelopatides02465CAMP-RESPONSIVE ELEMENT-BINDING PROTEIN-LIKE 2
Paelopatides02466THAP DOMAIN-CONTAINING PROTEIN 6
Paelopatides02467PROTEIN CBG26694
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