About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides02658GAG-RELATED PROTEIN
Paelopatides02659REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides02660PEPTIDASE S8
Paelopatides02661-
Paelopatides02662PARANEOPLASTIC ANTIGEN
Paelopatides02663PROTEIN CBG26694
Paelopatides02664-
Paelopatides02665-
Paelopatides02666-
Paelopatides02667-
Paelopatides02668-
Paelopatides02669PROTEIN CBG26694
Paelopatides02670CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
Paelopatides02671REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides02672ADHESION G-PROTEIN COUPLED RECEPTOR
Paelopatides02673BUCENTAUR RELATED
Paelopatides02674REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides02675PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides02676-
Paelopatides02677REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
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