Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8002490.1 | PEPTIDYLPROLYL ISOMERASE |
| CAI8002498.1 | GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE |
| CAI8002500.1 | GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE |
| CAI8002502.1 | GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE |
| CAI8002496.1 | |
| CAI8002494.1 | |
| CAI8002492.1 | |
| CAI8002504.1 | |
| CAI8002512.1 | CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 99 |
| CAI8002514.1 | CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 99 |
| CAI8002516.1 | CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 99 |
| CAI8002508.1 | CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 99 |
| CAI8002510.1 | CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 99 |
| CAI8002506.1 | CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 99 |
| CAI8002518.1 | CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 99 |
| CAI8002520.1 | FUCOSE MUTAROTASE |
| CAI8002522.1 | |
| CAI8002524.1 | PA-PL1 PHOSPHOLIPASE FAMILY |
| CAI8002526.1 | PA-PL1 PHOSPHOLIPASE FAMILY |
| CAI8002530.1 | BETA1,4 MANNOSYLTRANSFERASE |
| CAI8002532.1 | |
| CAI8002543.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8002541.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8002539.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8002537.1 | EPH RECEPTOR A5 |
| CAI8002545.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8002547.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8002549.1 | |
| CAI8002562.1 | STRAWBERRY NOTCH-RELATED |
| CAI8002560.1 | STRAWBERRY NOTCH-RELATED |
| CAI8002564.1 | STRAWBERRY NOTCH-RELATED |
| CAI8002566.1 | |
| CAI8002568.1 | |
| CAI8002582.1 | N-ACETYLGLUCOSAMINE-6-SULFATASE FAMILY MEMBER |
| CAI8002580.1 | N-ACETYLGLUCOSAMINE-6-SULFATASE FAMILY MEMBER |
| CAI8002578.1 | N-ACETYLGLUCOSAMINE-6-SULFATASE FAMILY MEMBER |
| CAI8002576.1 | N-ACETYLGLUCOSAMINE-6-SULFATASE FAMILY MEMBER |
| CAI8002574.1 | N-ACETYLGLUCOSAMINE-6-SULFATASE FAMILY MEMBER |
| CAI8002572.1 | N-ACETYLGLUCOSAMINE-6-SULFATASE FAMILY MEMBER |
| CAI8002570.1 | N-ACETYLGLUCOSAMINE-6-SULFATASE FAMILY MEMBER |
| CAI8002584.1 | N-ACETYLGLUCOSAMINE-6-SULFATASE FAMILY MEMBER |
| CAI8002586.1 | N-ACETYLGLUCOSAMINE-6-SULFATASE FAMILY MEMBER |
| CAI8002588.1 | |
| CAI8002590.1 | |
| CAI8002592.1 | |
| CAI8002594.1 | |
| CAI8002599.1 | |
| CAI8002607.1 | PHOSPHATIDYLCHOLINE TRANSFER PROTEIN |
| CAI8002605.1 | PHOSPHATIDYLCHOLINE TRANSFER PROTEIN |
| CAI8002603.1 |
