Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8002124.1 | |
| CAI8002135.1 | NADH-CYTOCHROME B5 REDUCTASE |
| CAI8002133.1 | NADH-CYTOCHROME B5 REDUCTASE |
| CAI8002131.1 | NADH-CYTOCHROME B5 REDUCTASE |
| CAI8002129.1 | NADH-CYTOCHROME B5 REDUCTASE |
| CAI8002137.1 | NADH-CYTOCHROME B5 REDUCTASE |
| CAI8002139.1 | |
| CAI8002148.1 | TRANSMEMBRANE 9 SUPERFAMILY PROTEIN |
| CAI8002152.1 | PROTEIN ECT2 |
| CAI8002154.1 | PROTEIN ECT2 |
| CAI8002150.1 | PROTEIN ECT2 |
| CAI8002156.1 | LD25575P |
| CAI8002158.1 | ALMS1-RELATED |
| CAI8002160.1 | |
| CAI8002164.1 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
| CAI8002166.1 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
| CAI8002168.1 | |
| CAI8002162.1 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
| CAI8002170.1 | SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED |
| CAI8002176.1 | ANOCTAMIN |
| CAI8002174.1 | ANOCTAMIN |
| CAI8002178.1 | ANOCTAMIN |
| CAI8002180.1 | ANOCTAMIN |
| CAI8002182.1 | |
| CAI8002184.1 | |
| CAI8002186.1 | |
| CAI8002191.1 | |
| CAI8002193.1 | |
| CAI8002197.1 | CARBOHYDRATE SULFOTRANSFERASE |
| CAI8002195.1 | CARBOHYDRATE SULFOTRANSFERASE |
| CAI8002199.1 | |
| CAI8002201.1 | |
| CAI8002203.1 | |
| CAI8002207.1 | |
| CAI8002205.1 | |
| CAI8002209.1 | |
| CAI8002216.1 | SPERMATID WD-REPEAT PROTEIN |
| CAI8002218.1 | |
| CAI8002214.1 | L-THREONINE ALDOLASE-RELATED |
| CAI8002220.1 | DED DOMAIN-CONTAINING PROTEIN |
| CAI8002222.1 | DED DOMAIN-CONTAINING PROTEIN |
| CAI8002224.1 | PHOSPHATIDYLINOSITOL GLYCAN, CLASS C |
| CAI8002226.1 | PHOSPHATIDYLINOSITOL GLYCAN, CLASS C |
| CAI8002228.1 | PHOSPHATIDYLINOSITOL GLYCAN, CLASS C |
| CAI8002230.1 | |
| CAI8002232.1 | TWO-COMPONENT RESPONSE REGULATOR |
| CAI8002243.1 | |
| CAI8002241.1 | |
| CAI8002259.1 | SRCR DOMAIN-CONTAINING PROTEIN |
| CAI8002253.1 | SRCR DOMAIN-CONTAINING PROTEIN |
