About Pseudoliparis swirei

The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m，which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Pseudoliparis swireiChordatahadal snailfishDeep sea7,254the Mariana Trench (142°26′E, 11°07′N)2059687

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
NWPU_hadal_v1626.4MbChromosome2023JANBZZ01Northwestern Polytechnical UniversityPRJNA85295196.00%21,161

References
TitleJournalPubmed ID
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebratesElife38134226

Gene Information

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Gene IDDescription
HS06251QUIESCIN Q6-RELATED SULFHYDRYL OXIDASE
HS06252CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 77
HS06253
HS06254RNA HELICASE
HS06255NUCLEOTIDE KINASE
HS06256HAMARTIN
HS06257
HS06258NEUROLIGIN
HS06259DOCKING PROTEIN RELATED
HS06260IONOTROPIC GLUTAMATE RECEPTOR
HS06261INSULIN-LIKE GROWTH FACTOR BINDING PROTEIN-RELATED
HS06262-
HS06263SURFEIT LOCUS PROTEIN
HS06264KH DOMAIN CONTAINING RNA BINDING PROTEIN
HS06265PR DOMAIN ZINC FINGER PROTEIN
HS06266MACROGLOBULIN / COMPLEMENT
HS06267PROTEIN NETWORKED 4A
HS06268TELO2-INTERACTING PROTEIN 2
HS06269PEPTIDYL-PROLYL CIS-TRANS ISOMERASE
HS06270
HS06271
HS06272ZINC FINGER MIZ DOMAIN-CONTAINING PROTEIN
HS062732-OXOGLUTARATE DEHYDROGENASE
HS06274ADAM A DISINTEGRIN AND METALLOPROTEASE DOMAIN
HS06275SNF2/RAD54 FAMILY MEMBER
HS06276SIGNAL RECOGNITION PARTICLE 19 KD PROTEIN
HS06277RTDR1
HS06278ACTIN-BINDING LIM PROTEIN
HS06279ACTIN FILAMENT-ASSOCIATED PROTEIN 1 FAMILY MEMBER
HS06280DRAB11-RELATED
HS06281MAINTENANCE OF KILLER 16 MAK16 PROTEIN-RELATED
HS06282SPINDLIN
HS06283MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10
HS06284
HS06285-
HS06286MUTT/NUDIX HYDROLASE
HS06287SUCCINATE DEHYDROGENASE ASSEMBLY FACTOR 1, MITOCHONDRIAL
HS06288
HS06289SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED
HS06290SHIELDIN COMPLEX SUBUNIT 3
HS06291PHOSPHATIDYLINOSITOL 3-KINASE REGULATORY SUBUNIT
HS06292PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN
HS06293GTPASE, IMAP FAMILY MEMBER-RELATED
HS06294ACTIN
HS06295REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
HS06296PROTEIN CBG26694
HS06297ACTIN
HS06298
HS06299ACTIN
HS06300GTPASE, IMAP FAMILY MEMBER-RELATED
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