About Pseudoliparis swirei

The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m，which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Pseudoliparis swireiChordatahadal snailfishDeep sea7,254the Mariana Trench (142°26′E, 11°07′N)2059687

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
NWPU_hadal_v1626.4MbChromosome2023JANBZZ01Northwestern Polytechnical UniversityPRJNA85295196.00%21,161

References
TitleJournalPubmed ID
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebratesElife38134226

Gene Information

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Gene IDDescription
HS06001UNCHARACTERIZED
HS06002FRIZZLED
HS06003EUKARYOTIC TRANSLATION INITIATION FACTOR 2C
HS06004RIM BINDING PROTEIN-RELATED
HS06005SYNTAXIN
HS06006ADHESION G-PROTEIN COUPLED RECEPTOR
HS06007SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED
HS06008E1A-BINDING PROTEIN P400-RELATED
HS06009NUCLEAR RECEPTOR CO-REPRESSOR RELATED NCOR
HS06010-
HS06011COILED-COIL DOMAIN-CONTAINING 74A
HS06012CHARGED MULTIVESICULAR BODY PROTEIN
HS06013LEUCINE-RICH REPEAT-CONTAINING PROTEIN
HS06014TYROSINE-PROTEIN KINASE RECEPTOR
HS06015
HS06016ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 39-RELATED
HS06017UNCHARACTERIZED
HS06018NEUROPEPTIDE Y RECEPTOR
HS06019LD33804P
HS06020T-BOX PROTEIN-RELATED
HS06021CALCINEURIN-BINDING PROTEIN CABIN 1-RELATED
HS06022GLIAL FIBRILLARY ACIDIC PROTEIN
HS06023DEDICATOR OF CYTOKINESIS
HS06024TASTE RECEPTOR TYPE 2
HS06025COXSACKIEVIRUS AND ADENOVIRUS RECEPTOR-RELATED
HS06026SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
HS06027SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
HS06028ANAPHASE-PROMOTING COMPLEX SUBUNIT 5
HS06029GAMMA GLUTAMYL TRANSPEPTIDASE
HS06030-
HS06031GAMMA GLUTAMYL TRANSPEPTIDASE
HS06032ASPARTATE BETA-HYDROXYLASE DOMAIN-CONTAINING PROTEIN 2
HS06033CALCIUM-BINDING PROTEIN 1-RELATED
HS06034UNCHARACTERIZED
HS06035
HS06036HERMANSKY-PUDLAK SYNDROME 4 PROTEIN LIGHT-EAR PROTEIN-RELATED
HS06037AGAP001331-PA-RELATED
HS06038CYTOCHROME C OXIDASE POLYPEPTIDE VIA
HS06039PHOSPHOLIPASE A2 FAMILY MEMBER
HS060405'-AMP-ACTIVATED PROTEIN KINASE , BETA SUBUNIT
HS06041NG5
HS06042RNA-BINDING PROTEIN MUSASHI HOMOLOG RBP6
HS06043HEPATOCYTE NUCLEAR FACTOR 1
HS06044CHROMOSOME 12 ORF 43 HOMOLOG
HS06045RETINAL PROTEIN 4
HS06046RIBONUCLEASE P_MRP PROTEIN SUBUNIT POP5
HS06047RING FINGER 10 FAMILY MEMBER
HS06048TANKYRASE 1 BINDING PROTEIN
HS06049BETA/GAMMA CRYSTALLIN
HS06050BETA/GAMMA CRYSTALLIN
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