About Pseudoliparis swirei

The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m,which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Pseudoliparis swireiChordatahadal snailfishDeep sea7,254the Mariana Trench (142°26′E, 11°07′N)2059687

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
NWPU_hadal_v1626.4MbChromosome2023JANBZZ01Northwestern Polytechnical UniversityPRJNA85295196.00%21,161

References
TitleJournalPubmed ID
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebratesElife38134226

Gene Information

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Gene IDDescription
HS05701
HS05702TYROSINE AMINOTRANSFERASE
HS05703ALDO/KETO REDUCTASE
HS05704
HS05705LD33804P
HS05706CORTACTIN AND DREBRIN
HS05707
HS05708ZINC FINGER PROTEIN
HS05709ATP-DEPENDENT DNA HELICASE
HS05710ATP-DEPENDENT DNA HELICASE
HS05711TYROSINE-PROTEIN KINASE RECEPTOR
HS05712
HS05713PAR-6-RELATED
HS05714PEPTIDE DEFORMYLASE
HS05715ZINC PHOSPHODIESTERASE ELAC PROTEIN 1
HS05716LIM DOMAIN KINASE 1
HS05717AGAP007712-PA
HS05718CALCINEURIN B HOMOLOGOUS PROTEIN 3
HS05719SI:DKEY-261L7.2
HS05720REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
HS05721
HS05722UNCHARACTERIZED RING FINGER-CONTAINING PROTEIN
HS05723UNCHARACTERIZED
HS05724
HS05725CORONIN
HS05726
HS05727D-AMINO ACID OXIDASE
HS05728SYNAPTIC VESICLE GLYCOPROTEIN 2
HS05729UBIQUITIN CARBOXYL-TERMINAL HYDROLASE
HS05730ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASE ALKB HOMOLOG 2
HS05731URACIL-DNA GLYCOSYLASE
HS05732PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17
HS05733UBIQUITIN
HS05734UNCHARACTERIZED
HS05735TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN
HS05736LD27203P-RELATED
HS05737
HS05738ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 13
HS05739GLYCOLIPID TRANSFER PROTEIN-RELATED
HS05740TRICHOPLEIN KERATIN FILAMENT-BINDING PROTEIN FAMILY MEMBER
HS05741TRANSIENT RECEPTOR POTENTIAL ION CHANNEL PROTEIN
HS05742
HS05743UNCHARACTERIZED
HS05744REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
HS05745MEVALONATE KINASE
HS05746CORRINOID ADENOSYLTRANSFERASE
HS05747ALDEHYDE DEHYDROGENASE
HS05748UBIQUITIN-PROTEIN LIGASE E3C
HS05749BTB/POZ DOMAIN-CONTAINING ADAPTER FOR CUL3-MEDIATED RHOA DEGRADATION PROTEIN FAMILY MEMBER
HS05750MYOSIN
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